Pairwise Alignments

Query, 346 a.a., IS481 family transposase from Erwinia tracheiphila SCR3

Subject, 349 a.a., ISDvu4, transposase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  288 bits (737), Expect = 1e-82
 Identities = 149/346 (43%), Positives = 210/346 (60%), Gaps = 8/346 (2%)

Query: 4   TNNPIIKHKAGLLNLAEELGNVSKACKIMGVSRDTFYR----YQELAAEGGIDALINQNR 59
           T   + + K  LL LA EL NVSKAC+IMG SR  FY     YQ   AEG +D L     
Sbjct: 3   TGKKVARRKLSLLELASELDNVSKACRIMGYSRQQFYEIRRNYQTFGAEGLVDRLPGPRE 62

Query: 60  RVPNLKNRADEATERAVVEYAVEFPAHGQHRTSNELRKKGVFISGSGVRSIWQRHDLENF 119
             PN   R DEATE  ++ Y++EFP HG  R + +L  +GV +S  GVR +W R+ +   
Sbjct: 63  PHPN---RVDEATEDRILAYSLEFPTHGPVRVAQQLVLQGVQVSSGGVRGVWSRNGMLTR 119

Query: 120 RKRLKALEEKVAREGIVLTDAQIAALEKKAHDDEASGEIETAHPGYLGSQDTFYVGNLKG 179
            +RL  LE  V   GI L D Q+  LE+ + +      IET   G L + DTF+VG LKG
Sbjct: 120 HERLLRLERHVRDTGIALNDDQVRTLERFSPEFRER-HIETRCSGDLVAVDTFFVGTLKG 178

Query: 180 VGRIYQQTFVDTYSKVAHCKLYTSKTPITAADLLNDRVLPFYEAQGLPMLRILTDSGTEY 239
           VG+IY Q+ +D +S+ A  +LYTSK P+TA  +LN+ VLPF+E    P++ +L+D+G E+
Sbjct: 179 VGKIYLQSAIDCHSRYAFGRLYTSKLPVTAVHMLNESVLPFFEEHDTPVVTVLSDNGREF 238

Query: 240 CGKVEQHDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILQDFYQVTFRKKLYEDLES 299
           CG+ ++H Y+L+L + +I+H  T+   PQ+NG  ER H+T+L + +++  RK  YE L+ 
Sbjct: 239 CGRPDRHPYELFLQLENIEHRTTRVRRPQSNGFVERLHRTLLDEHFRIQGRKNWYESLDE 298

Query: 300 LQTDLDNWLWHYNNERTHQGKMCCGRTPMATLLDGKRVWAEKNLNQ 345
           +Q DLD +L HYN+ER HQG+   GRTP    LD +     K  N+
Sbjct: 299 MQADLDAYLRHYNHERAHQGRNMSGRTPYQAFLDSRPEGQPKEDNE 344