Pairwise Alignments

Query, 242 a.a., two-component system response regulator BtsR from Erwinia tracheiphila SCR3

Subject, 236 a.a., response regulator (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  208 bits (530), Expect = 7e-59
 Identities = 110/238 (46%), Positives = 159/238 (66%), Gaps = 2/238 (0%)

Query: 1   MLRVVIVDDEPLARANLRLMLMEEPDITIVSECVNAIEAIGAVHRLKPDVLFLDIQMPRI 60
           M+  +IVDDE  AR  L   L +E DI I+ +C NAIEA+  + + KP ++FLDIQMPRI
Sbjct: 1   MITCLIVDDELFAREELADSLSQEADIEIIGQCSNAIEALQTITKEKPQLVFLDIQMPRI 60

Query: 61  NGLEMVSMLDDSHRPFIVFLTAFEEYALKAFEEHAFDYLLKPVASARLGKTLMRLRQQRQ 120
           +G+E+++MLD    P IVF+TAF+E+A+KAF+ HAFDYLLKP+ + RL KTL R+R+   
Sbjct: 61  SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDADRLSKTLKRVRKDLT 120

Query: 121 VLPAPQEHPQPLQFIPCSGHSRIYLLQIHDVAFVSCRMSGVYVTDNQGKEGLTELTLRTI 180
                   P+ L+ +PC   S++ ++ I DV +V   +SG++V   +GK   T+LTL+ +
Sbjct: 121 PQAVNLIAPRSLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVH-TQLTLKVL 179

Query: 181 ENRTTFLRCHRQYLVNMAQLKEICLQDNGQAELKLRCGLTVPVSRRYLKPLKKAWGYR 238
           E +T  + CHRQYL++   + EI L D G AE+    G  VPVSRRYLK LK+ +G++
Sbjct: 180 EEKTPLVHCHRQYLISPKAIAEIELLDTG-AEVTTLLGDKVPVSRRYLKSLKQLFGFQ 236