Pairwise Alignments

Query, 355 a.a., recombinase RecA from Erwinia tracheiphila SCR3

Subject, 350 a.a., RecA protein from Pseudomonas fluorescens FW300-N2E2

 Score =  496 bits (1276), Expect = e-145
 Identities = 251/351 (71%), Positives = 298/351 (84%), Gaps = 3/351 (0%)

Query: 3   IDENKQKALAAALGQIEKQFGKGSIMRLGEDRTMDVETISTGSLSLDIALGAGGLPMGRI 62
           +D+NK+KALAAALGQIE+QFGKG++MR+G+     + +ISTGSL LDIALG GGLP GRI
Sbjct: 1   MDDNKKKALAAALGQIERQFGKGAVMRMGDQDRQAIPSISTGSLGLDIALGIGGLPKGRI 60

Query: 63  VEIYGPESSGKTTLTLQVIAAAQRKGKTCAFIDAEHALDPVYAKKLGVDIDNLLCSQPDT 122
           VEIYGPESSGKTTLTL VIA AQ+ G TCAF+DAEHALDP YA KLGV++D+LL SQPDT
Sbjct: 61  VEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDT 120

Query: 123 GEQALEICDALARSGAVDVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGN 182
           GEQALEI D L RS AVDVIIVDSVAAL PKAEIEGE+GD H+GL AR+MSQA+RK+ GN
Sbjct: 121 GEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGN 180

Query: 183 LKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRIGAIKEGDEVVGSE 242
           +K +N L+IFINQIRMKIGVMFG+PETTTGGNALKFYASVRLDIRR GA+KEGDEVVGSE
Sbjct: 181 IKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSE 240

Query: 243 TRVKVVKNKVAAPFKQAEFQIMYGEGINVLGELVDLGVKHKLIEKAGAWYSYNGDKIGQG 302
           TRVKVVKNKVA+PF+QAEFQI+YG+GI + GE++DLGV H  +EK+GAWY+YNG KIGQG
Sbjct: 241 TRVKVVKNKVASPFRQAEFQILYGKGIYLNGEMIDLGVLHGFVEKSGAWYAYNGTKIGQG 300

Query: 303 KANAGNFLKENPAIASEIESKLRAMLLNN-PDSKPDFSADDADSHPISEAD 352
           KAN+  FL +NP +A+ +E +LR  LL+   D K   + + AD   +++AD
Sbjct: 301 KANSAKFLADNPEVAAALEKQLRDKLLSPVADVKSVANRETADD--LADAD 349