Pairwise Alignments

Query, 453 a.a., signal recognition particle protein from Erwinia tracheiphila SCR3

Subject, 457 a.a., signal recognition particle protein Ffh (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  670 bits (1728), Expect = 0.0
 Identities = 343/457 (75%), Positives = 400/457 (87%), Gaps = 4/457 (0%)

Query: 1   MFDNLTDRLSQTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFINRVKERAL 60
           MF+NLTDRLS+TL+NISGRGRLTE+N+K+TLREVRMALLEADVALPVVREF+N VKERA+
Sbjct: 1   MFENLTDRLSRTLKNISGRGRLTEENVKETLREVRMALLEADVALPVVREFVNNVKERAV 60

Query: 61  GQDVNKSLTPGQEFIKIVQNELVAAMGAENNTLNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           GQ+V KSL+PGQ FIKIVQ+EL  +MG  N  L+LA QPPAV++MAGLQGAGKTTSV KL
Sbjct: 61  GQEVAKSLSPGQAFIKIVQSELEKSMGEANQALDLATQPPAVVMMAGLQGAGKTTSVAKL 120

Query: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLEKLAEQVGVDFCPSDLSQQPVYIVKNALQQAK 180
           GK LR +HKK VLVVSADVYRPAAIKQLE LA +V V+F PSD+SQ+P+ I K A+  AK
Sbjct: 121 GKLLRTRHKKSVLVVSADVYRPAAIKQLETLATEVDVEFFPSDVSQKPIDIAKAAIAHAK 180

Query: 181 LKFYDVLLVDTAGRLHVDEAMMDEIKQVHAVINPVETLFVVDAMTGQDAANTAKAFNEAL 240
           LKF DV+++DTAGRLHVDEAMMDEIK +HA + P+ETLFVVDAMTGQDAANTAKAFNEAL
Sbjct: 181 LKFIDVVILDTAGRLHVDEAMMDEIKALHAALKPIETLFVVDAMTGQDAANTAKAFNEAL 240

Query: 241 PLTGVILTKVDGDARGGAALSIRHITDRPIKFMGVGEKTDALEPFYPDRIASRILGMGDV 300
           PLTGVILTKVDGDARGGAALSIRHIT +PIKF+GVGEKTDALEPF+PDRIASRILGMGDV
Sbjct: 241 PLTGVILTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV 300

Query: 301 LSLIEDIESKVDRVQAEKLASKLKKGDGFDLNDFLQQLKQMRNMGGMASLMGKLPGMGQL 360
           LSLIE++E  VD+ +A KLASK+K+G  FDL DF +QL+QM+NMGGM S++ KLPG+GQL
Sbjct: 301 LSLIEEVERGVDKEKAMKLASKVKQGGSFDLEDFREQLQQMKNMGGMMSMIEKLPGVGQL 360

Query: 361 PDNVKSQMDD-KVLVRMEAMINSMTRKEREKPEIIKGSRKRRVATGSGMQVQDVNRLLKQ 419
           P +  +Q+ D K+  +MEA+INSMT KER+ P++IKGSRKRR+A GSG ++QDVNRLLKQ
Sbjct: 361 PPDALAQIQDGKMTRQMEAIINSMTAKERKNPDLIKGSRKRRIAAGSGTEIQDVNRLLKQ 420

Query: 420 FDDMQRMMKKMK-KGGMAKMMRGMKGMMPPG--FPGR 453
           F  MQ+MMKKM  KGGM KMMRGM+GMMP G  FPGR
Sbjct: 421 FTQMQKMMKKMSAKGGMQKMMRGMRGMMPGGMKFPGR 457