Pairwise Alignments

Query, 453 a.a., signal recognition particle protein from Erwinia tracheiphila SCR3

Subject, 508 a.a., signal recognition particle protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  434 bits (1116), Expect = e-126
 Identities = 232/451 (51%), Positives = 314/451 (69%), Gaps = 8/451 (1%)

Query: 1   MFDNLTDRLSQTLRNISGRGRLTEDNIKDTLREVRMALLEADVALPVVREFINRVKERAL 60
           MFD+L+DRL+Q  R  SG+ +L E+NI++ LREVR+ALLEADV   VV++FI+RVKER L
Sbjct: 1   MFDSLSDRLTQAFRKFSGQSQLDENNIQEGLREVRLALLEADVNFKVVKDFIDRVKERCL 60

Query: 61  GQDVNKSLTPGQEFIKIVQNELVAAMGAENNTLNLAAQPPAVILMAGLQGAGKTTSVGKL 120
           GQDV KSLTP Q+ +K+V +ELV  +G     L+L    P VI+M GLQG+GKTTS  K+
Sbjct: 61  GQDVLKSLTPAQQVVKVVHDELVELLGGGTTELDLRGAQPGVIMMVGLQGSGKTTSSAKI 120

Query: 121 GKFLREKHKKKVLVVSADVYRPAAIKQLEKLAEQVGVDFCPSDLSQQPVYIVKNALQQAK 180
              LR K K +  +V  DVYRPAAI QL  LA Q+ + +  S    +P+ IV+ AL  AK
Sbjct: 121 ANLLR-KRKMRPYLVPVDVYRPAAIDQLVTLARQLDIPYYQSTPDMKPLDIVRAALADAK 179

Query: 181 LKFYDVLLVDTAGRLHVDEAMMDEIKQVHAVINPVETLFVVDAMTGQDAANTAKAFNEAL 240
            K    +L+DTAGRLHVDEA+MDE+  + A   P E LFV DAMTGQDA   A AFNE L
Sbjct: 180 EKQCTAVLLDTAGRLHVDEALMDELAALKATFAPQEILFVADAMTGQDAVTVADAFNEKL 239

Query: 241 PLTGVILTKVDGDARGGAALSIRHITDRPIKFMGVGEKTDALEPFYPDRIASRILGMGDV 300
            +TGV+LTK+DGDARGGAALSI+ +T   +K++G+GEK   +E F+PDR+A RILGMGD+
Sbjct: 240 GITGVVLTKMDGDARGGAALSIKSVTGASVKYVGIGEKLSDIEVFHPDRVAGRILGMGDM 299

Query: 301 LSLIEDIESKVDRVQAEKLASKLKKGDGFDLNDFLQQLKQMRNMGGMASLMGKLPGMGQL 360
           L+LIE  +S ++  +AE L  K ++   FDL DF  Q+++M+ +G +  ++  +PGMG L
Sbjct: 300 LTLIEKAQSTIEADEAEALTKKFQRA-SFDLEDFRTQMRRMKKLGSLEGILKMIPGMGAL 358

Query: 361 PDNV-KSQMDDKVLVRMEAMINSMTRKEREKPEIIKGSRKRRVATGSGMQVQDVNRLLKQ 419
            D + +  + +K + R+EA+I+SMT KER  P++I GSR+ R+A GSG  VQ+VN+LL+ 
Sbjct: 359 RDKLGQMSVPEKDMARIEAIISSMTMKERRNPDVINGSRRARIAKGSGTTVQEVNQLLRN 418

Query: 420 FDDMQRMMKK---MKKGGMAKMMR--GMKGM 445
           F+ M+ MMK+   M K G  +M R  GM GM
Sbjct: 419 FEQMREMMKRVMNMGKPGGGRMPRIPGMGGM 449



 Score = 26.9 bits (58), Expect = 0.002
 Identities = 10/18 (55%), Positives = 13/18 (72%)

Query: 344 MGGMASLMGKLPGMGQLP 361
           +GG+  L G +PGMG LP
Sbjct: 465 LGGLGGLRGGMPGMGGLP 482