Pairwise Alignments

Query, 317 a.a., sigma-E factor regulatory protein RseB from Erwinia tracheiphila SCR3

Subject, 312 a.a., putative sigma E regulatory protein, MucB/RseB (RefSeq) from Shewanella amazonensis SB2B

 Score =  122 bits (306), Expect = 1e-32
 Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 14/295 (4%)

Query: 20  IAPAETTPGALLQQMEQASQSLSYELAYINVSRSGIESLRYRHAVLNNKVYAQLLPMDGP 79
           ++  + +  A L++M +A     ++++ I++    I  L Y H  +N +  A L  ++GP
Sbjct: 15  VSAQDLSAKAWLEEMSRALNQEQFKMSVIHLQADHIRPLVYLHGKVNGQEVAFLEHLNGP 74

Query: 80  RREIIQRGNEISYFEPGLSPFTLAGEHIVDALPSLVYANFPK-LAAFYDFVPVGRTRIAD 138
            +  ++  N +++ E     FT+  + I    P+ V+AN P  + A Y FV  GR+RIA 
Sbjct: 75  IKNAVRIDNRVTFIEHDQPAFTVNADRIQGLWPA-VFANDPAGIEAGYQFVLGGRSRIAG 133

Query: 139 QLCDIIRVVPRDGTRYSFIVWLDSDTRLPLRIDLLDRDGETLEQYRVISFAVDDGVQKIM 198
           +   ++R +P D  RY   VW+D +T LPLR +LL  + E LEQ  V+   V +    ++
Sbjct: 134 RPGQLVRFIPNDPHRYPLQVWVDMETYLPLRYELLTDEKELLEQIMVVELLVLEEPAPLL 193

Query: 199 QGLEKANLPLGMPLPASEKKD----FNWMPGWLPDGMKEVMQSRRQIPSINKPVESRLYS 254
               K + P     P   + D     NW   WLP+G K V +   ++    +PVE    +
Sbjct: 194 VEAAKQDWP-----PVINQLDRHDGQNWTFTWLPEGFKVVARDHHRLMGSQEPVEYVAIT 248

Query: 255 DGLFSFSINVTAADKNSSPQ--LVRTGRRTVQTAIRNNTEITVIGELPPSTAKLI 307
           DG+ + S+ V  A     P   L R G   V   +  N E+  +G +P +T   I
Sbjct: 249 DGIANISVYVGRAGNVPMPDELLTRNGLGLVSEKV-GNAEVVAVGRVPMATLSRI 302