Pairwise Alignments

Query, 346 a.a., flagellar motor protein MotB from Erwinia tracheiphila SCR3

Subject, 349 a.a., OmpA/MotB from Pseudomonas syringae pv. syringae B728a

 Score =  206 bits (524), Expect = 7e-58
 Identities = 116/321 (36%), Positives = 185/321 (57%), Gaps = 15/321 (4%)

Query: 4   NTHPIIVVRKKKHKGNEGGHGSWKIAYADFMTALMAFFMVMWLISISTPAQRESIAEYFK 63
           N  PII+ R K+  G   G G+WKIA+ADF TA+MAFF+V+WL+S +TP Q  ++A YFK
Sbjct: 3   NNQPIIIKRVKRFGGGHHG-GAWKIAFADFATAMMAFFLVLWLMSSATPEQLLAVAGYFK 61

Query: 64  TPLKVAITGGTRTSE---SVSVIPGGGQDPTQKIGEVHKVVDMDAEKRN-----MDKIRL 115
            P+  + +G     +   S  + P    +P  +       V ++AE        +++ RL
Sbjct: 62  DPVGFSDSGSPYVIDLGGSPEMSPNQTLNPEVQTTPSPDTVPLEAENAETKAEAVEQERL 121

Query: 116 NRLREKLDQLIEADPRLKALRQHLIINMVEEGLRIQIIDSQNRPMFKTGSAEVEPYMRDI 175
             L ++L   +E +P+L+  +  ++  + ++GLRIQI+D++NRPMF +GSA ++PY  DI
Sbjct: 122 EMLLQELQTKVEENPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDI 181

Query: 176 LRAIAPILNNIPNKISLAGHTDDFQYATGDRGYSNWELSTDRANASRRELVIGGLDAGKM 235
           L A+A  + ++PNK+S++GHTD   +  G  G+ NWELS +RANA+RR LV G     ++
Sbjct: 182 LLALADTIKSVPNKVSISGHTDATPF-VGSGGFGNWELSANRANAARRALVAGTYPDSQV 240

Query: 236 LRVLGMADTMKLNNRGANDAVNRRISLLVLNHDTEMQIEKENSESDAVQIDNSDPANLKQ 295
            RV+G A +   + +   + +NRRI ++VL    + +IE + +   A     +  A    
Sbjct: 241 ARVVGYASSALYDRQNPTNPINRRIDIVVLTKKAQHRIEGDQNSGGAPATPAAPTA---- 296

Query: 296 IVAPPIPSAANNNPAPQPSQA 316
             AP +P+A     AP  S A
Sbjct: 297 -PAPAVPAAPGAPAAPGASTA 316