Pairwise Alignments

Query, 346 a.a., flagellar motor protein MotB from Erwinia tracheiphila SCR3

Subject, 335 a.a., flagellar motor protein MotB from Burkholderia phytofirmans PsJN

 Score =  263 bits (672), Expect = 5e-75
 Identities = 140/323 (43%), Positives = 196/323 (60%), Gaps = 21/323 (6%)

Query: 2   KHNTHPIIVVRKKKHKGNEGGHGSWKIAYADFMTALMAFFMVMWLISISTPAQRESIAEY 61
           K     I+V R    K    G G+WK+AYADFMTA+MAFF++MWL+S ++  Q + IA+Y
Sbjct: 3   KDKDRAIVVKRAAPKKAGHHG-GAWKLAYADFMTAMMAFFLLMWLLSSASTVQLKGIADY 61

Query: 62  FKTPLKVAITGGTRTSESVSVIPGGGQDPTQKI--------------------GEVHKVV 101
           F  PLK+ + GG R++E  S++ GGG+D +                       G    + 
Sbjct: 62  FNQPLKITLWGGDRSAEDSSILKGGGRDISTDAQGVTRSSEGSNNRAEHSAAHGSEDSIK 121

Query: 102 DMDAEKRNMDKIRLNRLREKLDQLIEADPRLKALRQHLIINMVEEGLRIQIIDSQNRPMF 161
            +  E    +++RL+ L+ KL   IEA+P L+  +Q + I+    GLRI+I+DSQ RPMF
Sbjct: 122 QLQGELERREQVRLHDLQVKLMAAIEANPVLRQFKQQIRIDSTLTGLRIEIVDSQKRPMF 181

Query: 162 KTGSAEVEPYMRDILRAIAPILNNIPNKISLAGHTDDFQYATGDRGYSNWELSTDRANAS 221
            T   +VEPYMRDILR I   LN++PN+I + GHTD  QYA G++GYSNWELS DRANAS
Sbjct: 182 ATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADRANAS 241

Query: 222 RRELVIGGLDAGKMLRVLGMADTMKLNNRGANDAVNRRISLLVLNHDTEMQIEKENSESD 281
           RREL+ GG+D  K++RVLG+A T  LN     D  NRRIS++VLN  +E  +  ++S + 
Sbjct: 242 RRELIGGGMDEAKVMRVLGLASTQNLNKADPMDPENRRISIIVLNRKSEEALNHDDSTTT 301

Query: 282 AVQIDNSDPANLKQIVAPPIPSA 304
            +  D +    L Q +A P+  A
Sbjct: 302 TLSDDAAGSKPLLQKLAQPVTVA 324