Pairwise Alignments

Query, 599 a.a., aspartate--tRNA ligase from Erwinia tracheiphila SCR3

Subject, 591 a.a., aspartyl-tRNA synthetase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  811 bits (2095), Expect = 0.0
 Identities = 399/587 (67%), Positives = 470/587 (80%), Gaps = 4/587 (0%)

Query: 1   MRTEYCGQINLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRQEAFKLA 60
           MR+ YCG +N SHVGQ+VTL GWVNR RDLG ++F+D+RDREG+VQV +DPD  E F +A
Sbjct: 1   MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVA 60

Query: 61  SELRNEFCIQLTGTVRARDEKNKNGEMATGDVEVFATGLAIINRAEPLPL--DANQANSE 118
           S LR EFC+Q+ G VRAR +   N +M TG++EV    L IIN +EPLPL  D  Q NSE
Sbjct: 61  STLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSE 120

Query: 119 EARLKYRYLDLRRPDMVQRLKTRAAITSFVRRFMDDNGFLDIETPMLTRATPEGARDYLV 178
           E RLKYRYLDLRRP+M QRL  RA +TS VRRF+D NGFLDIETP+LT+ATPEGARDYLV
Sbjct: 121 EQRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLV 180

Query: 179 PSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVETSF 238
           PSR +KG+F+ALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQID+ETSF
Sbjct: 181 PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF 240

Query: 239 MTAPQVRALMEKMVRQLWQSQINIDLGDFPVMTYAEAMHRYGSDKPDLRNPMELVDVGDL 298
           MT+ QV    E+M+R L+   +N+DLG+FP MTY EAM R+GSDKPDLRNP+ELVDV DL
Sbjct: 241 MTSEQVMNKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADL 300

Query: 299 LKQVEFKVFSGPANDAKGRVAALRVPGGAQLSRKQIDEYGKFVEIYGAKGLTWMKVNHRA 358
           LK VEF VFSGPAND +GRVAALR+PGGA LSRKQID+Y KFV IYGAKGL WMK+N   
Sbjct: 301 LKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLT 360

Query: 359 VGPDGISSPVAKFLSAEIIEEILFRTDAADGDCIFFGADCASVVADALGALRLKVGCDLA 418
            G +GI SPV KFL+  I+ EI+ RT A  GD I FGAD A+VVA+++GALRLK G D  
Sbjct: 361 QGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGEDFN 420

Query: 419 IVKADSWAPLWVVDFPMFEENGEGGLSAMHHPFTAPRDMTPEELQKAPETAIANAYDMVI 478
           +++   W PLWVVDFPMFE+   G   A+HHPFTAPR +TP+EL+  P   +++AYDMV+
Sbjct: 421 LLEG-QWRPLWVVDFPMFEKI-NGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVL 478

Query: 479 NGYEVGGGSVRIHNGEMQQTVFGILGINQQEQREKFGFLLDALKFGAPPHAGLAFGLDRL 538
           NG E+GGGSVRIHN EMQ  VF ILGI  +E +EKFGFLL+AL++G PPHAGLAFGLDR+
Sbjct: 479 NGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRI 538

Query: 539 VMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANPASLGELGIEVAK 585
           +ML+TG  +IRDV+AFPKTT AAC +T AP FANP  L ELGI V K
Sbjct: 539 IMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVK 585