Pairwise Alignments

Query, 550 a.a., flagellar hook-associated protein FlgK from Erwinia tracheiphila SCR3

Subject, 688 a.a., Flagellar hook-associated protein FlgK from Pseudomonas fluorescens FW300-N2E2

 Score =  238 bits (607), Expect = 6e-67
 Identities = 147/452 (32%), Positives = 244/452 (53%), Gaps = 19/452 (4%)

Query: 3   NLINTALSGINAASAALNTTSNNISNYSVAGYSRQTTILAQSNSTLTGTNYIGNGVSVSS 62
           +L+N  +SG++A+  AL TT NNI+N   AGYSRQ T+     S   G  +IG+G +++ 
Sbjct: 2   SLLNIGMSGLSASQTALVTTGNNIANVDTAGYSRQQTVQTTKASNQYGNVFIGSGTTLAD 61

Query: 63  VNREYDVFITNQLRAASTSSSALSTQYSQLSNIDNMFSSTTNTLSTNMQGFFSSLQTLVS 122
           V R Y+ ++  QL+  ++ +S  +    Q++ +D++ S +   L+  +  FF+S+Q + +
Sbjct: 62  VRRVYNSYLEAQLKTTTSLNSDAAAYQGQITPLDSLLSDSGTGLNGALTKFFASVQNVNA 121

Query: 123 NADDSSARQAVLGKADGLVNQFQVTDTYLKNLDSSLNTSVSSMVDQINGYAKQIANVNQQ 182
              D ++RQ +L  A  L N+F    + L   + ++N ++S+MVDQIN  A  +A +N++
Sbjct: 122 KPGDDASRQLLLSDAQALSNRFNSVASQLTAQNENINGNLSNMVDQINNLATTVAQLNKK 181

Query: 183 ITKLTGAGAGTAPNDLLDQRDQLVSKLNDLVGVTVSQQDGGSYSISIGNGISLVQGDSYN 242
           I +++ AG   APNDLLD R + + +L+   G  V  ++G S  I +G+G  LV G+  N
Sbjct: 182 IAEVSNAGG--APNDLLDARSETIRQLSTFTGTQV-VENGSSLDIYLGSGQPLVMGNITN 238

Query: 243 QLAAVASSADPGRTTIATVDASTGAKTEIPEKLVATGSLGGLLAFR-TDLDNTRNQLGQL 301
           +L AV    DPGR  I     ++G+      +++  G +GGL+ +R T LD   N+LG++
Sbjct: 239 KLEAVPDKNDPGRIGI---QLNSGSSVMDLTQVLTGGEIGGLMRYRSTVLDPAMNELGRV 295

Query: 302 ALGLASSFNTQHEAGYDSNGDMGGAFFN-------YGSPSVTTNTSNKGTASMTAMVADA 354
           AL +A   N+   +G D NG  G   F+           SV +  ++ G+ +    + D 
Sbjct: 296 ALVVADQMNSIQASGIDKNGAFGSNLFSSINSAAQMSQRSVASLGNSAGSGNFNVSIEDT 355

Query: 355 SAVEASNYKVSY-DGTNWNVTRLSDNASVTTTSSTDSSGNSTLSFDGLQLTL-GGTAQAK 412
             +  ++YK+++   TN+ V RL DN S+   S+T +        DG  LT   G A A 
Sbjct: 356 GKLTTNDYKITFTSATNYTVQRLPDNTSLGAFSTTTTPAPVV---DGFSLTFANGPAAAG 412

Query: 413 DSFLVKPVSNVISSMSVNITDEAKLAAAGSDG 444
           DSF + P  N   S+   +TD  +LA A   G
Sbjct: 413 DSFKITPTRNAAGSIKTEMTDSKRLAIAAPLG 444