Pairwise Alignments

Query, 262 a.a., tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM from Erwinia tracheiphila SCR3

Subject, 284 a.a., methyltransferase type 12 (RefSeq) from Shewanella loihica PV-4

 Score =  196 bits (499), Expect = 3e-55
 Identities = 99/257 (38%), Positives = 151/257 (58%), Gaps = 4/257 (1%)

Query: 1   MQDRNFDDIAEKFSQNIYGTTKGRIRQAIVRQELDDILASLPTGPLRVLDAGGGEGRTSC 60
           +QD+NFD +A KF++NIYGT KG +R A++ +++   +  LP GPLR+LDAGGG G  S 
Sbjct: 25  VQDKNFDALAGKFAKNIYGTPKGEVRAAVLWRDISQAMTQLPEGPLRILDAGGGFGFFSQ 84

Query: 61  QLAALGHRVLLCDLSEEML--NRARTHAAEKGVSENMQFKQISA--QQISQDLDKPADLV 116
           +LA LGH V LCD+S EML   +A+    E    E +    + A  Q ++++     DL+
Sbjct: 85  KLAKLGHSVTLCDISSEMLALGQAQITEYENNSGEKLDITLLHAPIQSLTREELGQFDLI 144

Query: 117 LFHAVLEWVADPEAVLVALYDALVPGGVLSLMFYNVNGLMMQTLVLGNFGYMQADLRKRK 176
           L HAV EW++D +  L  L   L P G+ SLMFYN   +   +L+ GNF Y+ AD + +K
Sbjct: 145 LCHAVAEWLSDAKQTLAGLTQLLKPQGLFSLMFYNKEAMRFHSLISGNFDYVAADFKVKK 204

Query: 177 RKTLSPDHPRDPEQVYGWLEDVGFVVENKTGIRVFHDYMRDRHKQTERFEEILALEKRFC 236
           +  L+P +P   + V GW+ D    +   +G+RV HDY++        F ++L +E ++ 
Sbjct: 205 KVGLTPSYPLYIDDVRGWVSDWQMELVTASGVRVIHDYLKTHQPPNSDFSQLLEMELQYS 264

Query: 237 RQEPFLSLGRYIHVTAR 253
               ++ LGRY+H   R
Sbjct: 265 THPAYIGLGRYVHFITR 281