Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Erwinia tracheiphila SCR3

Subject, 377 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella loihica PV-4

 Score =  278 bits (711), Expect = 2e-79
 Identities = 152/368 (41%), Positives = 218/368 (59%), Gaps = 7/368 (1%)

Query: 10  QQLIRCPSLSPDDAGCQAIMIDRLQALGFTVEPMNIGDTLNFCA-WRGTGETLAFAGHTD 68
           ++L+R PS++P+DAGCQ  + +RL A+GF V         N  A +      LA AGHTD
Sbjct: 5   RELMRRPSITPEDAGCQQWLGERLVAMGFDVSHYQDKGVSNLLASFDERPAQLALAGHTD 64

Query: 69  VVPAGNVSRWINPPFEPTIRDGLLYGRGAADMKGSLAAMIVAAERFVASHPDHQGRLAFL 128
           VVP G++SRW  PPF  T+ DG+L GRGA DMK  LA M+ A E  +A +   +    F+
Sbjct: 65  VVPPGDLSRWQTPPFAATLVDGMLIGRGAVDMKSGLAVMLAAVEDHIACYGLPKANWQFI 124

Query: 129 ITSDEEASATNGTVKVVEALMARNERLDYCLVGEPSSTEIVGDVVKNGRRGSMTANLTVH 188
           +TSDEE  A +GT  +VE L A++    YC+V EP++ +  GDV+K GRRG+++A LT+ 
Sbjct: 125 VTSDEEGEAEHGTRTLVERLKAQSRLPKYCVVAEPTADKQAGDVIKIGRRGAISARLTLK 184

Query: 189 GVQGHVAYPHLADNPVHRVLPALNELATTEWDGGNAFFPPTSMQIVSIQAGTGSNNVIPG 248
           G QGHVAYP  A N +H     +  L    WD G+  FP TS+Q+  + +G  ++N++PG
Sbjct: 185 GKQGHVAYPKNAVNALHMAARVMQALEALIWDEGSDDFPGTSLQVTHVDSGAFTDNIVPG 244

Query: 249 ECVVQFNFRFSTELTEEMIKERVQMLLDHYQL---RYTLDWQVSGQPFLTHSG---KLVD 302
            C + FN R+S   +E  I  R+Q  LD   L     +L W+   QP+ T       L+ 
Sbjct: 245 SCEICFNIRYSYRYSEAGIMARIQACLDGLSLGEDAISLRWERGCQPYHTQENDEQSLIA 304

Query: 303 AVVNAVEHYNEIKPQLQTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVKAADLQLL 362
            V  A+       P+L T+GGTSDGRF++    QV+ELG  N TIH++NE V+ A +  L
Sbjct: 305 QVEAAIFEVTASFPRLSTSGGTSDGRFLSSPQTQVIELGLPNRTIHQVNERVELAQIVRL 364

Query: 363 SRMYQRIM 370
            R+Y+ ++
Sbjct: 365 YRIYRALL 372