Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Erwinia tracheiphila SCR3

Subject, 376 a.a., succinyl-diaminopimelate desuccinylase (RefSeq) from Shewanella loihica PV-4

 Score =  455 bits (1170), Expect = e-132
 Identities = 222/371 (59%), Positives = 276/371 (74%), Gaps = 1/371 (0%)

Query: 5   VIELTQQLIRCPSLSPDDAGCQAIMIDRLQALGFTVEPMNIGDTLNFCAWRGT-GETLAF 63
           V+ L Q LI   S++P D GCQ +M  RL A GF +EPM   DT N  A RG  G    F
Sbjct: 5   VLTLAQDLIARASVTPLDEGCQPLMAKRLAAKGFNIEPMVFEDTTNMWARRGDQGPLFCF 64

Query: 64  AGHTDVVPAGNVSRWINPPFEPTIRDGLLYGRGAADMKGSLAAMIVAAERFVASHPDHQG 123
           AGHTDVVP G+++RW  PPFEP + DG L+GRGAADMKGSLAAM+VA ERFV  HPDH+G
Sbjct: 65  AGHTDVVPVGDLNRWHTPPFEPVVIDGYLHGRGAADMKGSLAAMVVATERFVDKHPDHKG 124

Query: 124 RLAFLITSDEEASATNGTVKVVEALMARNERLDYCLVGEPSSTEIVGDVVKNGRRGSMTA 183
            +AFLITSDEE    NGT +V++ L ARNE++ + LVGEPSST  +GD+VKNGRRGS+T 
Sbjct: 125 SIAFLITSDEEGPFINGTTRVIDTLEARNEKITWSLVGEPSSTHKLGDIVKNGRRGSLTG 184

Query: 184 NLTVHGVQGHVAYPHLADNPVHRVLPALNELATTEWDGGNAFFPPTSMQIVSIQAGTGSN 243
           NLTV GVQGHVAYPHLADNP+H+  PAL+ELA  +WD GN FFPPTS QI +I  GTG++
Sbjct: 185 NLTVKGVQGHVAYPHLADNPIHKAAPALDELARMKWDNGNEFFPPTSFQIANINGGTGAS 244

Query: 244 NVIPGECVVQFNFRFSTELTEEMIKERVQMLLDHYQLRYTLDWQVSGQPFLTHSGKLVDA 303
           NVIPG   V FNFR+STE+T E++ +RV  +LD + L Y + W  +G PFLT +G L+DA
Sbjct: 245 NVIPGSLEVMFNFRYSTEVTAEILIQRVLNILDAHGLDYDISWIFNGLPFLTDAGPLLDA 304

Query: 304 VVNAVEHYNEIKPQLQTTGGTSDGRFIARMGAQVVELGPVNATIHKINECVKAADLQLLS 363
              A+      +   QT+GGTSDGRFIA  GAQV+ELGPVNATIHK+NECVK  D++ L+
Sbjct: 305 TREAIYEITGTETDPQTSGGTSDGRFIAPTGAQVIELGPVNATIHKVNECVKVEDIEQLA 364

Query: 364 RMYQRIMEQLI 374
           ++Y+RI+E+L+
Sbjct: 365 KVYERILEKLL 375