Pairwise Alignments

Query, 346 a.a., IS481 family transposase from Erwinia tracheiphila SCR3

Subject, 346 a.a., ISSod13, transposase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  610 bits (1573), Expect = e-179
 Identities = 290/346 (83%), Positives = 319/346 (92%)

Query: 1   MIHTNNPIIKHKAGLLNLAEELGNVSKACKIMGVSRDTFYRYQELAAEGGIDALINQNRR 60
           M+H+NNPIIKHK GLLNLAEEL NVS+ACK+MGVSRDTFYRY+EL  +GG+DALI ++RR
Sbjct: 1   MLHSNNPIIKHKTGLLNLAEELSNVSRACKVMGVSRDTFYRYRELVDDGGVDALIEKSRR 60

Query: 61  VPNLKNRADEATERAVVEYAVEFPAHGQHRTSNELRKKGVFISGSGVRSIWQRHDLENFR 120
            PNLKNR +EA E+AV+EYA+EFPAHGQHRTSNELRKKGVF+SGSGVRSIW RHDLENF+
Sbjct: 61  SPNLKNRVEEAVEQAVMEYAIEFPAHGQHRTSNELRKKGVFVSGSGVRSIWLRHDLENFK 120

Query: 121 KRLKALEEKVAREGIVLTDAQIAALEKKAHDDEASGEIETAHPGYLGSQDTFYVGNLKGV 180
           KRLKALE KVAR+GI LTD QIAALE+K HDDEA GEIETAHPGYLGSQDTFYVGNLKGV
Sbjct: 121 KRLKALEAKVARDGIQLTDEQIAALERKKHDDEACGEIETAHPGYLGSQDTFYVGNLKGV 180

Query: 181 GRIYQQTFVDTYSKVAHCKLYTSKTPITAADLLNDRVLPFYEAQGLPMLRILTDSGTEYC 240
           GRIYQQT+VDTY KVAHCKLYT+KTPITAADLLND+VLPFYE+Q LP+LRILTD GTEYC
Sbjct: 181 GRIYQQTYVDTYCKVAHCKLYTTKTPITAADLLNDKVLPFYESQQLPVLRILTDRGTEYC 240

Query: 241 GKVEQHDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILQDFYQVTFRKKLYEDLESL 300
           GKVE HDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTIL +FYQVTFRKKLY+ LE L
Sbjct: 241 GKVEHHDYQLYLAINDIDHTKTKAMSPQTNGICERFHKTILNEFYQVTFRKKLYQTLEEL 300

Query: 301 QTDLDNWLWHYNNERTHQGKMCCGRTPMATLLDGKRVWAEKNLNQM 346
           Q DLD WL +YNNERTHQGKMC GRTP+ TL+DGKRVWAEKNL ++
Sbjct: 301 QKDLDEWLSYYNNERTHQGKMCNGRTPVETLIDGKRVWAEKNLTRI 346