Pairwise Alignments

Query, 355 a.a., phage major capsid protein, P2 family from Erwinia tracheiphila SCR3

Subject, 336 a.a., phage major capsid protein, P2 family from Vibrio cholerae E7946 ATCC 55056

 Score =  122 bits (306), Expect = 1e-32
 Identities = 96/339 (28%), Positives = 156/339 (46%), Gaps = 27/339 (7%)

Query: 1   MRQETRFKFNAYLTQLAKLNGISVDDVSKKFTVEPSVTQTLMNTVQASSAFLQTINILPV 60
           + Q  R   + +  QLAK  G+S  +V++ F V P +   L   +  S+ FL+ I +  V
Sbjct: 5   LTQSAREYMDNFAQQLAKSYGVS--NVAELFNVSPQLETKLRAAITESAEFLKMITVTTV 62

Query: 61  AEMKGEKIGVGVTGTIASTTDTSGDKERQTADFTALESNKYECNQINFDFHLTYKRLDLW 120
            +++G+ + VGV+G + +     G   +Q      +  +KY+  + +    +T+  L  W
Sbjct: 63  DQIEGQVVDVGVSG-LYTGRKAGGRFTKQVG----VGGHKYKLAETDSCAAITWAMLCQW 117

Query: 121 ARF---QDFQRRIRDAIVQRQALDFIMAGFNGTTRADTSDRSKNPMLQDVAVGWLQKYRN 177
           A       F + + +   Q  ALD +  G+NG +    +D S NP+ QDV  GW+   +N
Sbjct: 118 ANQGGRDQFMKHLTEFSNQMFALDIMRIGWNGVSAEADTDPSANPLGQDVNEGWIAFVKN 177

Query: 178 EAPARVMSNITDADGKVVSAVIRVGKNGDYENLDALVMDGTNTLIDEIYQDDPKLVAIVG 237
               R  S + D D      V     NGDY  LDA+  D  N  I  ++++DP+L   VG
Sbjct: 178 ----RKASQVVDVD------VYFDETNGDYRTLDAMASDIINNQIHPMFRNDPRLTVFVG 227

Query: 238 RKLLADKYFPLVNKQQENTESLAADIIISQKRIGNLPAVRVPYFPANAVFVTTLENLSIY 297
             L+      L +K  + +E +AA  +   K I   PA   P+ P NA+ VT  ENL + 
Sbjct: 228 SGLIGAAQAKLYDKADKPSEQIAAQKL--DKTIAGRPAYVPPFLPDNAMVVTIPENLQVL 285

Query: 298 FMDESHRRSIDENPKKDRVENYESMNIDYVVEAYAAGCL 336
               + +R       + + E     N  + +E YA G L
Sbjct: 286 TQHGTAQRKAKHESDRKQFE-----NAYWRMEGYAVGVL 319