Pairwise Alignments

Query, 574 a.a., autotransporter assembly complex protein TamA from Erwinia tracheiphila SCR3

Subject, 582 a.a., outer membrane protein assembly factor from Vibrio cholerae E7946 ATCC 55056

 Score =  431 bits (1109), Expect = e-125
 Identities = 232/570 (40%), Positives = 340/570 (59%), Gaps = 14/570 (2%)

Query: 7   LFSVVPCAQAVTVRLQVTGLSGDLQKNVRARLSTIAGDEVTADGRFRARVNEAIKEGLKA 66
           LFS V  A    V+L++TG+SG  + NV A LS+IA  + +   RF++++  ++ E L A
Sbjct: 25  LFSAVSYAD---VKLEITGISGAEKDNVEAYLSSIAAQDYSTSLRFQSQLERSMTEALNA 81

Query: 67  LGYYEPEIAFELQPPPPGGRRPVLLAKVTPGEPVILAGETVILRGGASKDPDYLALRGTG 126
           LGYY P I F +           L A VT GE   L+   +++RG A  D D+  L    
Sbjct: 82  LGYYHPSIDFTVSED-----NQRLRAAVTLGEVTRLSEVDIVIRGEAEGDRDFQRLIRRS 136

Query: 127 RGKIGKVLNHGDYDSFKSVLSNMALRKGYFDADYSKSQLAVSVQRRQAFWDIDYNSGDRY 186
             ++   LNH  YD+ KS + N+AL+KGYF+ D+  S+L V  +  QA   + ++SG RY
Sbjct: 137 GLRVDAPLNHSLYDNLKSGIRNLALQKGYFNGDFQASRLEVIPELNQARVILHFDSGIRY 196

Query: 187 RFGDVSFEGSQVREEYLQNLVPFKKGDYYNSRQLAELNRRLSASGWFNSVVVSPQFDQAC 246
            FG  + EGSQ+ E  + +L PFK+G+ Y   Q+ E N+ LS + WF+SV V P   Q  
Sbjct: 197 LFGATTVEGSQIDENRVMSLRPFKQGEPYLVSQVGEFNQNLSNTDWFSSVFVEPDLSQLD 256

Query: 247 TSKVLPLHGVLSPRTENTIETGVGYSTDVGPRVKATWKRPWVNTYGHSFSTSANISAPEQ 306
             + LP+   L+P+  N +ETG+GYSTDVG R    WK+PWVN+ GHSF +S ++S PEQ
Sbjct: 257 EGRELPIKVTLAPQARNQLETGLGYSTDVGVRGSLKWKKPWVNSQGHSFDSSFSLSIPEQ 316

Query: 307 QLDFSYKIPLLKAPIEQYYLLQGGLKRTDLNDTQADSSTLAASRYWEADSGWQRAVNLHW 366
            +   YKIPL  A + +YY +Q G+K  D  DT++  S L+  R+W+ D GW R V + +
Sbjct: 317 TITAGYKIPLEDA-LNEYYRIQYGMKHLDKRDTESLESNLSLERHWQLDGGWHRTVFIRY 375

Query: 367 SLGHFTQANVTNTTMLIYPGVSINRTRSR--GGLMPDWGDSQRYSLDVSDTSWGSDIDFA 424
            L ++ Q    + +  + PG++  RTR+R   GL+  WGD Q  +L+  D +  S+    
Sbjct: 376 LLENYRQGLQDDNSQFLLPGMTYTRTRTRSNSGLL-TWGDKQTITLEYGDPALLSETRVL 434

Query: 425 VVQAQNVWIRTLAEKHRFVMRGNLGWIETNSFERVPPDLRFFSGGDRSIRGYKYKGISPR 484
            +Q  + W+RT A  HR ++R + G    + F+++ P LRFF+GGD ++RGY YK ISP+
Sbjct: 435 RLQTGSSWLRTYARNHRALVRVDGGANLVDEFDQLSPSLRFFAGGDNNLRGYGYKSISPQ 494

Query: 485 DDDGKLTGASKLATGSLEYQYNVSGKWWGAVFVDSGEAVNDIKQSNFKTGVGFGVRWQSP 544
           D  G LTGA  +AT S+EYQY ++G WW A+F+D G+A ND     +K GVG G+RW SP
Sbjct: 495 DASGALTGAKYIATSSIEYQYRLTGNWWAAMFMDVGDAFND--NPEWKKGVGTGIRWISP 552

Query: 545 VGPVKLDIARPIRDDENRDIQFYIGLGPEL 574
           VGP++LD A  +      + + +  LGPEL
Sbjct: 553 VGPIRLDFAWGLDAAPGDEFKIHFTLGPEL 582