Pairwise Alignments

Query, 574 a.a., autotransporter assembly complex protein TamA from Erwinia tracheiphila SCR3

Subject, 636 a.a., surface antigen (D15) (RefSeq) from Shewanella loihica PV-4

 Score =  288 bits (738), Expect = 4e-82
 Identities = 194/591 (32%), Positives = 301/591 (50%), Gaps = 41/591 (6%)

Query: 19  VRLQVTGLSGDLQKNVRARLSTIAGDEVTADGRFRARVNEAIKEGLKALGYYEPEIAFEL 78
           ++++V G +  L++N+ A L  + G EV     +     E I+  L +LGYY+ +I  +L
Sbjct: 52  LKVEVDGANESLKRNITAHLGALPGSEVQRRA-YIFNAEENIEAALHSLGYYKGKIDQQL 110

Query: 79  QPPPPGGRRPVLLAKVTPGEPVILAGETVILRGGASKDPDYLALRGTGRGKIGKVLNHGD 138
           + P  G     L   VTPG P ++    + L G    D    A     + K G VLNHG+
Sbjct: 111 ESPESGPW--TLRLTVTPGAPTVIQWIDIQLSGEILDDEVINAWLRQIKVKPGDVLNHGE 168

Query: 139 YDSFKSVLSNMALRKGYFDADYSKSQLAVSVQRRQAFWDIDYNSGDRYRFGDVSFEGSQV 198
           Y++ KS L   AL +GYF+  Y  +++ V+     A   + Y+SG RYR G+VSF G  +
Sbjct: 169 YEAIKSQLLTYALARGYFEGKYLTNKIVVNRDLDSAQISLHYDSGPRYRIGEVSFNGHDL 228

Query: 199 REEYLQNLVPFKKGDYYNSRQLAELNRRLSASGWFNSVVVSPQFDQACTSKVLPLHGVLS 258
              +L  L+PF+   +Y++ ++  LNR L  +G+F ++ V PQ D+    +V P+   ++
Sbjct: 229 VPGFLDKLIPFEPDSHYSTGKIGALNRELVDTGYFTNIKVLPQLDKMQDDRV-PIRVEVT 287

Query: 259 PRTENTIETGVG------YSTDVGPRVKATWKRPWVNTYGHSFSTSANISAPEQQLDFSY 312
           P+  ++IE G+G         ++ PRV+ TW+ P +N YGHS  TS   S    +   +Y
Sbjct: 288 PKPSHSIELGLGADIGNSIDNNIEPRVRVTWRTPQINRYGHSQETSLEWSPDRPKFLTTY 347

Query: 313 KIPLLKAPIEQYYLLQGGLKRTDLNDTQ----------------ADSSTLAASRYWEADS 356
            IPL   P++    L+ GL R     TQ                +    +   R     +
Sbjct: 348 TIPLTH-PLDDQLKLRLGLLRDKYGVTQIYDPDKRDYRNTGELESVKKLVGVVRQKRLHN 406

Query: 357 GWQRAVNLHWSLGHFTQANVTNTTMLIYPGVSINRT-RSRGGLMPDWGDSQRYSLDVSDT 415
            W    +L      +TQ+++     ++  G S+++T R    L P  G  Q YSL+ +D 
Sbjct: 407 QWLFTYSLDAINEEYTQSDIKYNPDILLLGTSLSKTNRGDKSLDPKSGFFQYYSLEHADP 466

Query: 416 SWGSDIDFAVVQAQNVWIRTLAEKHRFVMRGNLG--WIETNSFERVPPDLRFFSGGDRSI 473
           S GSD+    +QA+  WI T  +KHRFV R +LG   +       VPP LR+F+GGD+SI
Sbjct: 467 SLGSDLRLTRLQAKFKWIDTFFDKHRFVSRLDLGANLVSEEDLPMVPPSLRYFAGGDQSI 526

Query: 474 RGYKYKGISP-------RDDDGKL-TGASKLATGSLEYQYNVSGKWWGAVFVDSGEAVND 525
           RGY Y+ + P       +D   ++  G   L  GSLEYQY ++  W  A FVD+G A  D
Sbjct: 527 RGYSYQELGPYIEYTNSQDQLARMVVGGRYLMVGSLEYQYYLTPTWRLATFVDAGNAF-D 585

Query: 526 IKQSNFKTGVGFGVRWQSPVGPVKLDIARPIRDDE--NRDIQFYIGLGPEL 574
            +Q      VG GV W SP+GP+KLD+   +++ E  +R  + +I +G EL
Sbjct: 586 NQQFEPIVSVGGGVHWISPIGPIKLDLGVGLKETETVDRSWRIHITMGAEL 636