Pairwise Alignments

Query, 731 a.a., replication restart DNA helicase PriA from Enterobacter asburiae PDN3

Subject, 818 a.a., primosomal protein N' (replication factor Y) (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  342 bits (878), Expect = 3e-98
 Identities = 185/471 (39%), Positives = 276/471 (58%), Gaps = 10/471 (2%)

Query: 198 LNTEQATAVGAIHSASDHFSAWLLAGVTGSGKTEVYLSVLENMLAQGKQALVMVPEIGLT 257
           LN  Q  A   I  +    +  LL GVT SGKTEVY+ ++E  + QGKQ L ++PEI LT
Sbjct: 282 LNEFQQRAHDEIVQSFQEKNVCLLHGVTSSGKTEVYIHLIEETIRQGKQVLYLLPEIALT 341

Query: 258 PQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAA-IVIGTRSSLFTPFKNLGVI 316
            Q   R +  F + + + HS   D+ER+  W K    +   I++G RSS+F PF++LG++
Sbjct: 342 TQITERLQRVFGSRLGIYHSKFPDAERVEIWRKQLGDKGYDIILGVRSSVFLPFRDLGLV 401

Query: 317 VIDEEHDSSYKQQE-GWRYHARDLAVYRAHSEQIPIILGSATPALETLHNVRQRKYHMLR 375
           ++DEEH+++YKQQ+   RYHAR+ A+  A       +LG+ATP++ET  N R  KY  ++
Sbjct: 402 IVDEEHENTYKQQDPAPRYHARNAAIVLAAMYGAKTLLGTATPSIETWQNARNGKYGFVQ 461

Query: 376 LTRRAGNARPAIQHVLDLKG----QQVQAGLAPALITRMRQHLQAGNQVILFLNRRGFAP 431
           L  R    +      +D+K     +++    +P LI  M++ L+   QVILF NRRGFAP
Sbjct: 462 LKERYKEIQLPEIIPVDIKELHRKRRMVGQFSPLLIQYMKEALEQKEQVILFQNRRGFAP 521

Query: 432 ALLCHDCGWIAECPRCDHYYTFHQAQRHLRCHHCDSQRPVPRQCPSCGSTHIVPVGLGTE 491
            + C  CGW+ +C  CD   T+H+    L CH+C     +P+ CP+C  T +V  G GTE
Sbjct: 522 MIECRTCGWVPKCKNCDVSLTYHKGINQLTCHYCGYTYQLPKFCPACEGTELVNRGFGTE 581

Query: 492 QLEQALGPFFPDVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVT 551
           ++E  +   FP+  ++R+D DTT  + A E+ +A+  +G   ILIGTQM++KG  F  V+
Sbjct: 582 KIEDDIKVLFPEAAVARMDLDTTRTRAAYEKIIADFEQGKTDILIGTQMVSKGLDFDHVS 641

Query: 552 LVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLHK 611
           +V +L+ D  L   DFRS ER  QL  QVAGRAGR  K+G VVLQT   +HP++  ++  
Sbjct: 642 IVGILNADTMLNYPDFRSYERAFQLMAQVAGRAGRKNKRGRVVLQTKSIDHPIIHQVIGN 701

Query: 612 GYDAFAEQALAERQTMQLPPWTSHVIIRAEDHN----NQQAPLFLQQLRNL 658
            Y+   +  LAERQ    PP+   V +  ++HN    +Q A +  ++LR +
Sbjct: 702 NYEEMVDGQLAERQMFHYPPYYRLVYVYLKNHNEALLDQMAAVMAEKLRTV 752



 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 2/101 (1%)

Query: 6   VALPVPLPRTFDYLLPDSMSAKA--GCRVTVPFGKQQRVGIVVSVSDKSELPLNELKSVV 63
           V LP+PLP+ F Y LPD  + +   GCRV VPFG+++    +V           E+K + 
Sbjct: 7   VILPLPLPKYFTYSLPDECAEEVEIGCRVIVPFGRKKFYTAIVRNVHYCAPTEYEVKDIS 66

Query: 64  EVLDSEPVYSTSTWRLLLWAADYYHHPIGDVLFHALPIMLR 104
            +LD+ P+  ++ ++   W ADYY    GDV   ALP  L+
Sbjct: 67  ALLDASPILLSTQFKFWEWLADYYLCTQGDVYKAALPSGLK 107