Pairwise Alignments

Query, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Enterobacter asburiae PDN3

Subject, 934 a.a., DNA polymerase I from Vibrio cholerae E7946 ATCC 55056

 Score = 1209 bits (3127), Expect = 0.0
 Identities = 607/934 (64%), Positives = 738/934 (79%), Gaps = 4/934 (0%)

Query: 1   MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAV 60
           M  IP+NPLIL+DGSSYLYRA+HA+P   ++   PT A+YGV+NM+RS++ Q+     AV
Sbjct: 1   MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMMRQFASDRMAV 60

Query: 61  VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEADDVIGT 120
           +FDAKGKTFRDE+++ YK+HRPPMPD+LR Q+EPLH +++AMGLPLLA+ GVEADDVIGT
Sbjct: 61  IFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIRAMGLPLLAIEGVEADDVIGT 120

Query: 121 LAREAEKMGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFL 180
           LAR+A + G PVLISTGDKDMAQLV   ITLINTMTN +L  E V+ K+G+PPELIID+L
Sbjct: 121 LARQASQAGMPVLISTGDKDMAQLVDDNITLINTMTNVVLDREGVIEKFGIPPELIIDYL 180

Query: 181 ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLSFRGAKTMAGKLEENK 240
           ALMGD  DNIPGVPGVGEKTA ALLQG+GGL+ LYA  DKIA L FRG+KTMA KLEEN+
Sbjct: 181 ALMGDKVDNIPGVPGVGEKTATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENR 240

Query: 241 EVAYLSYKLATIKTDVELELGCEQLEVQQPSADDLLSLFKKYEFKRWITDV---EAGKWL 297
             A LSY+LATIK DVELE   + L  Q P  D L+SL+ K  FK W+T++     G   
Sbjct: 241 GNAKLSYQLATIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVT 300

Query: 298 QAKGAKPAAKPKETIVVDAEEQAEEEAVALSFDNYETILEESQLIAWIEKLKKAPVFAFD 357
             +  K ++    T    A    E  A  +    Y+TIL E     W+EKLK+A +FAFD
Sbjct: 301 ADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEKLKQAELFAFD 360

Query: 358 TETDSLDNISANMVGLSFATEPGIAAYVPVAHDYLDAPEQISRERVLELLKPILEDEKAL 417
           TETD+LD + AN+VG+SFA   G AAY+PVAHDYLDAP+Q+ R+ V+  LKP+LEDE   
Sbjct: 361 TETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQLERDWVIAQLKPLLEDESKA 420

Query: 418 KVGQNLKYDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITFEE 477
           KVGQNLKYD  ++  YG+ELRGI  DTML+SY+ +SV G+HDMDSL+ R+L+H  I+FE+
Sbjct: 421 KVGQNLKYDASVMARYGVELRGIRHDTMLQSYVYNSVGGKHDMDSLALRFLQHSCISFEQ 480

Query: 478 IAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKHEGPLNVFQHIEMPLVP 537
           +AGKGKNQLTFNQIALEEA +YAAEDADVTL+LH ++ P +++      V++ IEMPLVP
Sbjct: 481 VAGKGKNQLTFNQIALEEAAQYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVP 540

Query: 538 VLSRIERNGVKIDPTVLHNHSGELAQRLTELEQKAHELAGEPFNLSSPKQLQTILFEKQG 597
           VLSRIER GV ID  +L   S E+A RL +LEQ A+ELAG+PFNLSSPKQLQTILFE+  
Sbjct: 541 VLSRIERTGVMIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMK 600

Query: 598 IKPLKKTPGGAPSTSEEVLEELALDYPLPKVILQYRGLAKLKSTYTDKLPLMINPKTGRV 657
           +  L+KTP G PST+EEVL+ELALDYPLPKV+++YRGLAKLKSTYTDKLP MINP TGRV
Sbjct: 601 LPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLPKMINPSTGRV 660

Query: 658 HTSYHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIELRIMA 717
           HTSYHQAV ATGRLSSTDPNLQNIPVRNEEGRRIRQAF+AP  + I++ DYSQIELRIMA
Sbjct: 661 HTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVAPHGWKIMAVDYSQIELRIMA 720

Query: 718 HLSRDKGLLTAFAEGKDIHRATAAEVFGLPLDSVTNEQRRSAKAINFGLIYGMSAFGLSR 777
           HLS D+ LL AF +GKDIH ATAAE+ G+P+D V++EQRR AKA+NFGLIYGMSAFGL++
Sbjct: 721 HLSGDQALLDAFRDGKDIHAATAAEIIGVPIDQVSSEQRRRAKAVNFGLIYGMSAFGLAK 780

Query: 778 QLNIPRKESQKYMDLYFERYPGVLEYMERTRAQAKEKGYVETLDGRRLYLPDIKSSNAAR 837
           QL IPR E+Q+YMD YFERYPGV++YME TR++A + GYVET+ GRRL+LP+I S NA R
Sbjct: 781 QLGIPRGEAQEYMDKYFERYPGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMR 840

Query: 838 RAGAERAAINAPMQGTAADIIKRAMIAVDAWLEEE-KPRVKMIMQVHDELVFEVHKDDLD 896
           R  AERAAINAPMQGTAADIIK+AM+ VD W+E E   RVK++MQVHDELVFEV +  L 
Sbjct: 841 RKAAERAAINAPMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLS 900

Query: 897 AVSKKIHELMESSMTLDVPLLVEVGSGENWDQAH 930
            +  K+ +LMES+  L VPL+ E G G+NW+QAH
Sbjct: 901 EIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH 934