Pairwise Alignments

Query, 930 a.a., DNA polymerase I (EC 2.7.7.7) from Enterobacter asburiae PDN3

Subject, 924 a.a., DNA polymerase A (NCBI) from Rhodospirillum rubrum S1H

 Score =  701 bits (1810), Expect = 0.0
 Identities = 403/944 (42%), Positives = 569/944 (60%), Gaps = 48/944 (5%)

Query: 9   LILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAAVVFDAKGKT 68
           L LVDGS Y++RAYH+ PP+T + G P  A+YG   ML  L+      H AV+FD    +
Sbjct: 7   LYLVDGSGYIFRAYHSLPPMTRTDGTPVNAVYGFTAMLMKLLADMDADHLAVIFDKARVS 66

Query: 69  FRDELFEHYKSHRPPMPDDLRAQIEPLHTMVKAMGLPLLAVSGVEADDVIGTLAREAEKM 128
           FR+E++  YK+ RPP P+DL  Q   +   V+A  +P +   G EADD+I T A+ A   
Sbjct: 67  FRNEIYPLYKAQRPPPPEDLIPQFPLIREAVRAFNVPCIERDGFEADDLIATYAKRARAE 126

Query: 129 GRPVLISTGDKDMAQLVTPGITLINTMTNTILGPEEVVTKYGVPPELIIDFLALMGDSSD 188
           G  V + + DKD+ QLV  G+ L + M N  +GP EV  K+GV P+ +ID  AL GD+ D
Sbjct: 127 GAIVTVVSSDKDLMQLVGEGVALFDPMKNRAIGPAEVFEKFGVAPDKVIDVQALAGDAVD 186

Query: 189 NIPGVPGVGEKTAQALLQGLGGLDTLYAESDKIAGLSFRGAKTMAGKLEENKEVAYLSYK 248
           N+PGVPG+G KTA  L+   G L+TL A + +I     R +      L ++ E A +S +
Sbjct: 187 NVPGVPGIGVKTAAQLIGEYGDLETLLARAAEIKQPKRRQS------LLDHAEAARISLQ 240

Query: 249 LATIKTDVELELGCEQLEVQQPSADDLLSLFKKYEFKRWITDVEAGKWLQAKGA-KPAAK 307
           L  ++ DVE+          +P A+ L     +  F+  +  V A    +A    +PAA 
Sbjct: 241 LVRLRDDVEVSETLADFATAEPDAEVLAGFLAENGFRSLLARVTAVAHAKAGTTPQPAAA 300

Query: 308 PKETIVVDAEEQAEEEAVALSFDNYETILEESQLIAWIEKLKKAPVFAFDTETDSLDNIS 367
           P +                   D+Y  +   ++L  WI K + A + A DTETDSL    
Sbjct: 301 PAD-------------------DDYVLVNTLAELGVWIAKARAAGLVAIDTETDSLKARR 341

Query: 368 ANMVGLSFATEPGIAAYVPVAH--------DYLDAPEQIS----RERVLELLKPILEDEK 415
           A +VG+S A  PG A Y+P AH        D+  A   ++    +   L LL  +L D  
Sbjct: 342 ATLVGVSLAITPGRACYIPFAHGLRKAEGLDFDGAAPPVANIEDKAAALALLGDLLRDPG 401

Query: 416 ALKVGQNLKYDRGILQNYGIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITF 475
            LKVG NLK+D  +L N G+       DTM+ SY+LD     H MD L+   L  +TITF
Sbjct: 402 VLKVGHNLKFDLHVLANAGLSDVAPVDDTMVLSYVLDGTLHGHGMDELAGLHLGRRTITF 461

Query: 476 EEIAGKGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQKHEGPLNVFQHIEMPL 535
           EE+ GKGK Q+TF+Q+ L++A  YAAEDADVTL+L+L +  +L K E  + V + ++ P+
Sbjct: 462 EEVCGKGKGQITFDQVPLDKAVAYAAEDADVTLRLYLLLRDRLLK-EHMVRVHETLDRPM 520

Query: 536 VPVLSRIERNGVKIDPTVLHNHSGELAQRLTELEQKAHELAGEPFNLSSPKQLQTILFEK 595
           V +L+ +E  GV++D   L   SG+ A+R+ +LE + H LAG  FN++SPKQL  +LFE+
Sbjct: 521 VRILTDMEAAGVRVDALRLKALSGDFAKRMGDLEDQIHALAGHAFNVASPKQLGEVLFEE 580

Query: 596 QGIKPLKKT-PGGAPSTSEEVLEELALD-YPLPKVILQYRGLAKLKSTYTDKLPLMINPK 653
             +   KK+   GA ST  +VL++LA + + LP  +L +R  AKLK TYTD L   I+ +
Sbjct: 581 MSLTGGKKSRKTGAWSTDAQVLDQLAAEGHDLPARVLDWRQYAKLKGTYTDALVAEIDER 640

Query: 654 TGRVHTSYHQAVAATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYLIVSADYSQIEL 713
           TGRVHT+Y   V ATGRLSS DPNLQNIPVR+E GR+IR+AFIA   +L++SADYSQIEL
Sbjct: 641 TGRVHTTYGLTVTATGRLSSNDPNLQNIPVRSEAGRKIREAFIAAPGHLLISADYSQIEL 700

Query: 714 RIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLDSVTNEQRRSAKAINFGLIYGMSAF 773
           R++AH++    L  AFAEGKDIH  TA++VFG+P++ +    RR AKAINFG+IYG+SA 
Sbjct: 701 RLVAHVAGITALRQAFAEGKDIHAITASQVFGVPVEGMDPMVRRQAKAINFGIIYGISAH 760

Query: 774 GLSRQLNIPRKESQKYMDLYFERYPGVLEYMERTRAQAKEKGYVETLDGRRLYLPDIKSS 833
           GL++QL + R E+  ++  YF R+P +  YME  + +A+  G+V T  GRR+ +P I+  
Sbjct: 761 GLAQQLGVGRPEAAAFITAYFARFPEIRSYMETVKEEARTVGWVATPFGRRIPIPGIQDK 820

Query: 834 NAARRAGAERAAINAPMQGTAADIIKRAMIAVDAWLEEEKPRVKMIMQVHDELVFEVHKD 893
           N A RA AER AINAP+QG AADIIKRAMIA+   LE+     +M++QVHDEL+FE  + 
Sbjct: 821 NPAARAFAERQAINAPIQGGAADIIKRAMIALPPALEQAGLATRMLLQVHDELIFEAPEA 880

Query: 894 DLDAVSKKIHELMESSMTL-------DVPLLVEVGSGENWDQAH 930
           + +  +  +  +ME+++TL        VPL V+ G   +W +AH
Sbjct: 881 EAETAAALVKRVMETAVTLTDDQGERTVPLEVDTGIAASWAEAH 924