Pairwise Alignments

Query, 224 a.a., Sel1 repeat from Enterobacter asburiae PDN3

Subject, 693 a.a., Sel1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 15/197 (7%)

Query: 24  YKEQAEAGDARAQYYLADTYF----SSGDSKQAALWAEKAAKGGDVDAMGLLSQIL---- 75
           Y+  A+AGDA AQY LA  YF    +  D KQ   + + A +     A G L+ +     
Sbjct: 210 YQLAADAGDASAQYNLATLYFDGIATEVDPKQGIHYLQLAVEQNHGSATGYLANMYDFGW 269

Query: 76  FTQGNYAQAKALAQQATIAGSKRGAIMLARVLVNTQAGKTDYPQAIKLLQTAAEDIDNDS 135
           F + +   A  L Q+A   G     + LA    + Q    D   A++L Q AA+  +N  
Sbjct: 270 FVEQDKKLAIQLYQRAAELGDAGSMVNLATFFESGQFVPQDIDMALQLYQLAAQQ-NNAL 328

Query: 136 AVDAQMLLGLIYANGVEVAQDDVQAASWFKRSSALSRTGYAEYWAGMLFRQGEKGFITPN 195
           A++    +  IY NG  V ++       F +++ ++ T  A Y  G+++R G    +  +
Sbjct: 329 ALNN---MASIYFNGEYVERNTELGLELFNKAATMNNT-QALYNLGIIYRDGNT--VKRD 382

Query: 196 KQKALYWLNLSCTEGFD 212
           + KAL +   +   G +
Sbjct: 383 RAKALSFFQQAADLGLE 399



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 39/182 (21%), Positives = 71/182 (39%), Gaps = 21/182 (11%)

Query: 18  DEIGSQYKEQAEAGDARAQYYLADTYFSSG----DSKQAALWAEKAAKGGDVDAMGLLSQ 73
           D++   Y  ++   ++ A +YL   Y+ S     D  +A  + EKA   G++D    L Q
Sbjct: 419 DQLALPYLLKSANNNSLATHYLGVIYYKSDLIEHDIDKAITYFEKAYSQGEIDPTASLGQ 478

Query: 74  ILFTQGNYAQAKALAQQATIAGSKRGA--------IMLARVLVNTQAGKTDYPQAIKLLQ 125
           I      +           IA  K+G         + LA + +N +    +    ++L  
Sbjct: 479 IY----EFGSPSHHDVDLAIAWYKKGIKGEHPYAYMRLALLYMNGEGVAKNMQHGLELYS 534

Query: 126 TAAEDIDNDSAVDAQMLLGLIYANGVEVAQDDVQAASWFKRSSALSRTGYAEYWAGMLFR 185
           T  +        +  M LG ++  G ++ Q D Q A +F   +   +   A    G ++R
Sbjct: 535 TYCK----LRKYNENMKLGNLFFFGNQIKQ-DYQQARYFYELALKQQDSTAANNLGEMYR 589

Query: 186 QG 187
            G
Sbjct: 590 LG 591



 Score = 27.3 bits (59), Expect = 8e-04
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 22  SQYKEQAEAGDARAQYYLADTYFSSGDSKQAALWAEKAAKGGDVDAMGLLSQIL 75
           S  K+ AE  ++ AQY L         +    +W  ++A  G+  A+  L Q L
Sbjct: 640 SWLKKAAETDNSEAQYRLGKYLLDRNVTSAGKIWMSRSADAGNEKAIEYLQQKL 693



 Score = 24.6 bits (52), Expect = 0.005
 Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 31  GDARAQYYLADTYFSSG----DSKQAALWAEKAAKGGDVDAMGLLSQILFTQGNYAQAKA 86
           G A A   L++ Y        D K    W +KAA+  + +A   L + L  +   +  K 
Sbjct: 613 GQATAMLNLSELYLEGEGVPVDEKLGLSWLKKAAETDNSEAQYRLGKYLLDRNVTSAGKI 672

Query: 87  LAQQATIAGSKRGAIMLARVL 107
              ++  AG+++    L + L
Sbjct: 673 WMSRSADAGNEKAIEYLQQKL 693