Pairwise Alignments

Query, 327 a.a., transcriptional regulator, LacI family from Enterobacter asburiae PDN3

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  212 bits (539), Expect = 1e-59
 Identities = 119/304 (39%), Positives = 188/304 (61%), Gaps = 5/304 (1%)

Query: 1   MKDVARMAGVSTSTVSHVINNDRFVSEAIREKVEAAVKELNYAPSALARSLKLNQTRTIG 60
           MKDVA++AGVST+TVS  + N   VS + R++VE AV E  Y+P++LAR+L+ N+++TI 
Sbjct: 4   MKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESKTIV 63

Query: 61  MLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLC 120
            ++    +P++SE++RG+E +  E GY ++L ++   ++R N  +  +  K+ DG+LLL 
Sbjct: 64  AIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGMLLLG 123

Query: 121 TETHQPSKEIIQRYPSIPTVMM--DWAPFDGTSDLIQDNSLLGGDMATQHLIDKGHTRIA 178
           T+      +  Q+  ++P ++M  ++AP      +  DN L     A  +L   GH RIA
Sbjct: 124 TDLPFDVSKPEQK--NLPPMVMACEFAPELELPTVHIDN-LTSAFEAVNYLTQLGHKRIA 180

Query: 179 CITGPLDKTPARLRLEGYLSAMERAGLAIPDGYRITGDFEFNGGFEAMQKLLAQKPRPQA 238
            I+GP      + R +GY  A+ RAG+ +   Y   GDF F  G +A+++LLA   +P A
Sbjct: 181 QISGPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPTA 240

Query: 239 VFIGNDAMAFGAYQALYQAGLRVPDDMAVIGYDDIELASYMTPPLTTIHQPKDELGELAI 298
           +F  ND MA GA Q   + GLRVP D++V+G+DDI+ A Y  PPLTTI QP+ E+G  A+
Sbjct: 241 IFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQAM 300

Query: 299 DVLI 302
            +++
Sbjct: 301 LMML 304