Pairwise Alignments

Query, 357 a.a., DNA replication and repair protein RecF from Enterobacter asburiae PDN3

Subject, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

 Score =  392 bits (1007), Expect = e-114
 Identities = 194/360 (53%), Positives = 247/360 (68%), Gaps = 5/360 (1%)

Query: 1   MSLTRLLIRDFRNIESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV 60
           M L+RL+I+ FRNI++ D+ LS GFNFL+G NGSGKTSVLEAIY LGHGR+F+S   GR+
Sbjct: 1   MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRI 60

Query: 61  IRHEQESFVLHGR-----LQGAERETAIGLTKDKQGDSKVRIDGTDGHKVAELALLMPMQ 115
           I++E     +HGR     L   + E  +G+ K + G ++V+I G  G K+A+LA ++P+Q
Sbjct: 61  IQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQ 120

Query: 116 LITPEGFTLLNGGPKYRRAFLDWGCFHNEAGFFNAWSNLKRLLKQRNAALRQVTRYAQLR 175
           LI PEGF LL  GPK RRAF+DWG FH E  FF+AW   KRL KQRNA L+    Y +L 
Sbjct: 121 LIHPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELS 180

Query: 176 PWDMELIPLAEQISNWRAEYSAGIAEDMADTCKQFLPEFSLTFSFQRGWEKETDYAEVLE 235
            WD EL  LAEQI  WR  Y   +       C+ FLPEF +   + RGWEK+  Y  +LE
Sbjct: 181 YWDQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSILE 240

Query: 236 RSFERDRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGR 295
           ++FERD+ L YT  GP+KAD RI+ +  PVED LSRGQLKL++CALR+AQG+ LT  +G+
Sbjct: 241 KNFERDQQLGYTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTGK 300

Query: 296 RCLYLIDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKI 355
           +C+YLIDDFASELD  RR  LA  LK T +QVFVS+I+   V DM DE+SK F V  G I
Sbjct: 301 QCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKTFHVAHGVI 360