Pairwise Alignments

Query, 357 a.a., DNA replication and repair protein RecF from Enterobacter asburiae PDN3

Subject, 360 a.a., DNA replication and repair protein RecF (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  316 bits (810), Expect = 5e-91
 Identities = 164/357 (45%), Positives = 229/357 (64%), Gaps = 1/357 (0%)

Query: 1   MSLTRLLIRDFRNIESADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV 60
           MSL RL I  FRNI+ A L+ S G N + G NGSGKTS+LEAIY LG GR+FRS    RV
Sbjct: 1   MSLIRLNIDSFRNIQLAQLSPSEGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRV 60

Query: 61  IRHEQESFVLHGRLQGAERETAIGLTKDKQGDSKVRIDGTDGHKVAELALLMPMQLITPE 120
           I ++Q+   L   L     ++ IGL + + G+++V+IDG    +++ LA  +P+Q+ITPE
Sbjct: 61  INNDQDKLTLFATLNLPRGDSKIGLRRFRSGETEVKIDGEKVKRLSTLAETLPIQVITPE 120

Query: 121 GFTLLNGGPKYRRAFLDWGCFHNEAGFFNAWSNLKRLLKQRNAALRQVTRYAQLRPWDME 180
            F+LL  GPK RR F+DWG FH +  F+ AW N++R+LKQRN  LR  + Y Q++ WD E
Sbjct: 121 SFSLLFEGPKSRRQFIDWGAFHTDPQFYAAWMNVRRVLKQRNQMLRNGSPYDQIQYWDRE 180

Query: 181 LIPLAEQISNWRAEYSAGIAEDMADTCKQFLPEFSLTFSFQRGWEKETDYAEVLERSFER 240
            I   EQ++  R  Y   + E +     +FLP+  +  SF RGW+ +TD+A++LE  + R
Sbjct: 181 FIRYTEQVTEIRNRYVDSLNELLKGIIGEFLPQVDVKVSFTRGWDSKTDFAQLLESQYPR 240

Query: 241 DRMLTYTAHGPHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL 300
           D    +T  GPHKAD R+R    P +D LSRGQLKLL+CALR+AQG+ L ++  +  +YL
Sbjct: 241 DLATGHTVSGPHKADLRLRVGTLPAQDALSRGQLKLLVCALRIAQGKLLKQQIDKHSIYL 300

Query: 301 IDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVID-MSDENSKMFTVEKGKIT 356
           +DD  SELD   R LL  +L  T +QVFV+AI    ++D +    S+MF VE G++T
Sbjct: 301 VDDLPSELDAQHRQLLLKQLVDTGAQVFVTAIEPAAIVDSLHTPPSRMFHVEHGRVT 357