Pairwise Alignments

Query, 785 a.a., DNA polymerase elongation subunit (family B) from Enterobacter asburiae PDN3

Subject, 801 a.a., DNA polymerase II (RefSeq) from Shewanella amazonensis SB2B

 Score =  645 bits (1663), Expect = 0.0
 Identities = 366/772 (47%), Positives = 491/772 (63%), Gaps = 21/772 (2%)

Query: 7   GFLLTRHWRDTPQGTEVAFWLATDSGPLHVTLPPQESVAFIPEAHVEKVKQLLRG-ENGW 65
           G +LTR        T + + + T +GP+ V +  Q  +AF     VE++  L+ G E   
Sbjct: 22  GRVLTRANVQRSGDTVLEYLIKTVNGPVKVEVHNQRPMAFCHSDDVERL--LVEGAETEV 79

Query: 66  RITPLELKDFHRQPVYGLYCRAHRQLMRYEKLLREAGVTLYEADIRPPERFLMERFITAP 125
              PLEL+ F RQPV+ +YCR    L R     +E G+ LYEADI+P +RFL+ERF+   
Sbjct: 80  WSHPLELQSFSRQPVHAIYCRTGLMLKRLVNRAQELGIALYEADIKPEQRFLIERFVALD 139

Query: 126 VWVDGIEQNGG---VVNARLKPNPHYRPPLKWVSLDIETTRHGELYCIGLEGCGDRVVYM 182
               G   + G    V +R++    + P LK VSLDIE +  GELY IGL G  +  V +
Sbjct: 140 AEFFGHFDSSGPSRFVASRVRATSQHIP-LKAVSLDIECSMSGELYSIGLYGDCEPKVII 198

Query: 183 LGPP------NGDASALDFRLEYVNSRPQLLDKLNQWFADYDPDVLIGWNVVQFDLRVLQ 236
           +G        + D       +E+      LL  L +WF + DPD+L+GW VV FDL +L 
Sbjct: 199 VGEGETELTCHRDGVEHKVAVEWACDEVALLLSLQRWFMEVDPDILLGWAVVTFDLSLLW 258

Query: 237 KHAERYRIPLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFSLE 296
           + A+ + + L +GR    L W+    K+       +GR+++DGI+ LK+AF+ F SF+L+
Sbjct: 259 RRAKHHGMRLCIGRFGKPLAWKVED-KHRPETLDLSGRVVLDGIDWLKAAFYQFDSFALD 317

Query: 297 AVAQELLGEGKSIDNPWDRMDEIDRRFNEDKPALATYNLKDCELVTQIFHKTEIMPFLLE 356
            VA ELLGEGK+I NP DR +EI R F EDK ALA YNL DC LV  IF KT+++ F LE
Sbjct: 318 RVAGELLGEGKAIHNPDDRGEEITRLFREDKAALAYYNLTDCRLVWDIFQKTDLIHFALE 377

Query: 357 RATVNGLAVDRHGGSVAAFSHLYFPRMHRAGYVAPNLGDVPPQASPGGYVMDSRPGLYDS 416
           RA + GL   R G S+AAF+HLY P +HRAG+VAP +  VP   SPGGYVMDS PGLY +
Sbjct: 378 RARLTGLEFGRVGASIAAFNHLYLPHLHRAGFVAPAMQTVPGPDSPGGYVMDSVPGLYRN 437

Query: 417 VLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDDEHSTEGFLGARFSREKHCLPEIVGNIW 476
           VLVLDYKSLYPSIIRTFLIDP GLV G+++P +  S EGF GARFSR+   LP++V  + 
Sbjct: 438 VLVLDYKSLYPSIIRTFLIDPKGLVLGLSEP-EAMSVEGFRGARFSRQSPILPKLVATLA 496

Query: 477 HGRDEAKRHGNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHEIMRQTKALI 536
             R+EAK + N P+SQA+KIIMN+ YGVLG+  C F D RLASSIT+RGHEIMR TKA I
Sbjct: 497 SRREEAKANQNGPMSQAVKIIMNSLYGVLGSRGCVFHDYRLASSITLRGHEIMRTTKAWI 556

Query: 537 ESRGYDVIYGDTDSTFVWLKGAHSEDDAARIGNDLVAFVNDWWQEHLQKER-LTSALELE 595
           E+ G+ VIYGDTDSTFVWL       +A   G  LV  VN  W+E L++++ L   LELE
Sbjct: 557 EAEGFQVIYGDTDSTFVWL--GDEAGNAKATGRALVDMVNQRWREQLREDKGLECFLELE 614

Query: 596 FETHFARFLMPTIRGTDQGSKKRYAGLIQEGDAQRMVFKGLETVRTDWTPLAQQFQQTLY 655
           FE HF +F MPT+R + +GSKKRY GL   G+ + +VFKG+E VR+DW+PLA++ Q  LY
Sbjct: 615 FERHFEQFFMPTLRHSTEGSKKRYVGLYDNGNEKVLVFKGMEQVRSDWSPLARRVQYELY 674

Query: 656 LRVFRNEPYQDYVRETIASLMAGELDAQLVYRKRLRRPLAEYQRNVPPHVRAARLADEEN 715
            R+F+ E   +YV+E   SL +GELD +LV+ KRL+R +++Y     PHV+AA L     
Sbjct: 675 RRLFQQENLTEYVQEVEKSLYSGELDDELVFHKRLKRDISQYTAKSAPHVKAAALLVSAT 734

Query: 716 VRRGRAPQYQNRGTIKYVWTISGPEPVDYQHSHLDYEHYLTRQLQPVADGIL 767
              G A + +    I+Y++T +G EP+ +Q   +DY++Y  RQL P+ + IL
Sbjct: 735 ---GDANRGKRGAAIRYLFTKAGAEPLGFQSQPIDYDYYYDRQLLPILEPIL 783