Pairwise Alignments

Query, 785 a.a., DNA polymerase elongation subunit (family B) from Enterobacter asburiae PDN3

Subject, 786 a.a., DNA polymerase II from Pseudomonas sp. BP01

 Score = 1085 bits (2806), Expect = 0.0
 Identities = 540/786 (68%), Positives = 626/786 (79%), Gaps = 4/786 (0%)

Query: 3   QAQEGFLLTRHWRDTPQGTEVAFWLATDSGPLHVTLPPQESVAFIPEAHVEKVKQLLRGE 62
           + Q+GF+LTRHW DTP+GT V FWLATD GP  + L PQ SVAFIP+AH    + LL  E
Sbjct: 2   ELQQGFVLTRHWHDTPEGTCVEFWLATDQGPRQLRLAPQVSVAFIPQAHEAHARVLLANE 61

Query: 63  NGWRITPLELKDFHRQPVYGLYCRAHRQLMRYEKLLREAGVTLYEADIRPPERFLMERFI 122
            G  + PL LKDF ++PV GLYCR HRQLM+ E+ LR AGV ++EADIRPPER+LMERFI
Sbjct: 62  PGVELRPLRLKDFDQRPVLGLYCRQHRQLMQLEQRLRTAGVEVFEADIRPPERYLMERFI 121

Query: 123 TAPVWVDGIEQNGGVV-NARLKPNPHYRPPLKWVSLDIETTRHGELYCIGLEGCGDRVVY 181
           TAPV   G     GV+  A+LKP+P YRPPL+ VSLDIET+  GELY I LEGCG R V+
Sbjct: 122 TAPVQFTGQPDAQGVLCEAQLKPSPGYRPPLRLVSLDIETSERGELYSIALEGCGQRQVF 181

Query: 182 MLGPPNGDASALDFRLEYVNSRPQLLDKLNQWFADYDPDVLIGWNVVQFDLRVLQKHAER 241
           MLGP NG A  LDF L Y   RP LL  LNQW A++DPD +IGWN+VQFDLR+L +HA+ 
Sbjct: 182 MLGPANGTADGLDFDLHYCADRPALLACLNQWMAEHDPDAIIGWNLVQFDLRLLHEHAKA 241

Query: 242 YRIPLMLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIEALKSAFWNFSSFSLEAVAQE 301
            ++PL LGR  + +  R H    G  FA A GRL+IDGIEAL+SA W+F SFSLE+VAQ 
Sbjct: 242 LQVPLALGRKGAPMTLRSHA-GGGHVFADAPGRLLIDGIEALRSATWSFPSFSLESVAQT 300

Query: 302 LLGEGKSIDNPWDRMDEIDRRFNEDKPALATYNLKDCELVTQIFHKTEIMPFLLERATVN 361
           LLGEGK+ID P+ RMDEI+RRF EDKPALA YNLKDCELVT+IF  T ++ FLLER++V 
Sbjct: 301 LLGEGKAIDTPYQRMDEINRRFAEDKPALARYNLKDCELVTRIFAHTRLLEFLLERSSVT 360

Query: 362 GLAVDRHGGSVAAFSHLYFPRMHRAGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLD 421
           GLAVDR GGSVAAF HLY P+MHR G+VAPNLG  P +ASPGG+VMDSRPGLYDSVLVLD
Sbjct: 361 GLAVDRSGGSVAAFCHLYMPQMHRMGFVAPNLGSRPDEASPGGFVMDSRPGLYDSVLVLD 420

Query: 422 YKSLYPSIIRTFLIDPVGLVEGMAQPDDEHSTEGFLGARFSREKHCLPEIVGNIWHGRDE 481
           YKSLYPSIIRTFLIDPVGLVEG+  PDDEHS EGF G RFSR +HCLP IV  +W GR+ 
Sbjct: 421 YKSLYPSIIRTFLIDPVGLVEGLRVPDDEHSVEGFRGGRFSRSQHCLPAIVERVWQGREA 480

Query: 482 AKRHGNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHEIMRQTKALIESRGY 541
           AKR GN  LSQALKIIMNAFYGVLG+S CRFFDPRLASSITMRGH+IMRQT+ALIE+RGY
Sbjct: 481 AKRDGNAALSQALKIIMNAFYGVLGSSGCRFFDPRLASSITMRGHQIMRQTRALIEARGY 540

Query: 542 DVIYGDTDSTFVWLKGAHSEDDAARIGNDLVAFVNDWWQEHLQKE-RLTSALELEFETHF 600
           DVIYGDTDSTFVWLKGAH+E+DAARIG +LVA VN WWQ HL +   L SALEL+FE H+
Sbjct: 541 DVIYGDTDSTFVWLKGAHAEEDAARIGRELVAEVNQWWQAHLHETMNLQSALELQFEVHY 600

Query: 601 ARFLMPTIRGTDQGSKKRYAGLIQEGD-AQRMVFKGLETVRTDWTPLAQQFQQTLYLRVF 659
            RFLMPTIRGTD+GSKKRYAGL+Q+ D ++ MV+KGLE+VRTDW+PLA++FQQ LY RVF
Sbjct: 601 RRFLMPTIRGTDEGSKKRYAGLVQQADGSEEMVYKGLESVRTDWSPLAREFQQALYGRVF 660

Query: 660 RNEPYQDYVRETIASLMAGELDAQLVYRKRLRRPLAEYQRNVPPHVRAARLADEENVRRG 719
           R +PY+DYV E +   +AGE D  LVYRKRLRRPLA+YQRNVPPHVRAARLADE N R G
Sbjct: 661 RGDPYRDYVCEYVRRTLAGEQDELLVYRKRLRRPLADYQRNVPPHVRAARLADEYNKRLG 720

Query: 720 RAPQYQNRGTIKYVWTISGPEPVDYQHSHLDYEHYLTRQLQPVADGILPFIDDDFATLVT 779
           R  QYQ  G I YV T +GPEP++   + +DY+HY++RQLQPVAD ILPF+ DDFA L  
Sbjct: 721 RPLQYQRGGWISYVITTAGPEPLENLQAPIDYDHYISRQLQPVADAILPFVGDDFARLTD 780

Query: 780 GQLGLF 785
            QL LF
Sbjct: 781 HQLLLF 786