Pairwise Alignments

Query, 273 a.a., ribosomal RNA small subunit methyltransferase A from Enterobacter asburiae PDN3

Subject, 317 a.a., Probable dimethyladenosine transferase KsgA (S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase) (16S rRNA dimethylase) (high level kasugamycin resistance protein KsgA) (kasugamycin dimethyltransferase) from Mycobacterium tuberculosis H37Rv

 Score =  139 bits (350), Expect = 8e-38
 Identities = 90/262 (34%), Positives = 140/262 (53%), Gaps = 17/262 (6%)

Query: 12  RKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALTEPVGERLDELTVIELDRDL 71
           RK  GQNF++D   +  +V+A    +   ++E+GPGL +LT  + +R   +T +E+D  L
Sbjct: 31  RKSLGQNFVHDANTVRRVVAASGVSRSDLVLEVGPGLGSLTLALLDRGATVTAVEIDPLL 90

Query: 72  AARLQ------THPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNISTPLMFH 125
           A+RLQ      +H  +  +LT+  +D + +   +L+     P  V  NLPYN++ P + H
Sbjct: 91  ASRLQQTVAEHSHSEVH-RLTVVNRDVLALRREDLA---AAPTAVVANLPYNVAVPALLH 146

Query: 126 LFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPP 185
           L     +I  +  M+Q EV  RL A P SK YG  SV  +++  V     V P+ F P P
Sbjct: 147 LLVEFPSIRVVTVMVQAEVAERLAAEPGSKEYGVPSVKLRFFGRVRRCGMVSPTVFWPIP 206

Query: 186 KVDSAVVRLVPHKTKPYPVKDL--RVLSRITTEAFNQRRKTIRNSL-----SNSFTVEVL 238
           +V S +VR+  ++T P+P  D   R +  +   AF QRRKT RN+      S S +   L
Sbjct: 207 RVYSGLVRIDRYETSPWPTDDAFRRRVFELVDIAFAQRRKTSRNAFVQWAGSGSESANRL 266

Query: 239 AELGIDPAMRAENISVEQYCKL 260
               IDPA R E +S++ + +L
Sbjct: 267 LAASIDPARRGETLSIDDFVRL 288