Pairwise Alignments

Query, 273 a.a., ribosomal RNA small subunit methyltransferase A from Enterobacter asburiae PDN3

Subject, 267 a.a., dimethyladenosine transferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  135 bits (341), Expect = 7e-37
 Identities = 87/256 (33%), Positives = 134/256 (52%), Gaps = 6/256 (2%)

Query: 12  RKRFGQNFLNDQFVIESIVSAINPQKGQAMVEIGPGLAALTEPVGERLDELTVIELDRDL 71
           +K  GQ+FL D  V + I   ++      ++E+GPG+  LT+ + ++   + V+E+D + 
Sbjct: 7   KKFLGQHFLKDLKVAQDIADTVDTFPELPVLEVGPGMGVLTQFLVKKDRLVKVVEVDYES 66

Query: 72  AARL-QTHPFLGPKLTIYQQDAMTMNFGELSEKMGQPLRVFGNLPYNISTPLMFHLFSYT 130
            A L + +P L     I + D + MN   L +  G+P  + GN PYNIS+ + F +    
Sbjct: 67  VAYLREAYPSLEDH--IIEDDFLKMNLHRLFD--GKPFVLTGNYPYNISSQIFFKMLENK 122

Query: 131 DAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCNVIPVLEVPPSAFTPPPKVDSA 190
           D I     M+QKEV  R+ AGP SK YG LSV+ Q +  V  +  V    F PPPKV SA
Sbjct: 123 DIIPCCTGMIQKEVAERIAAGPGSKTYGILSVLIQAWYKVEYLFTVSEHVFNPPPKVKSA 182

Query: 191 VVRLVPHKTKPYPVKDLRVLSRITTEAFNQRRKTIRNSLSNSFTVEVLAELGIDPAMRAE 250
           V+R+  + TK     D ++  ++    FNQRRKT+RNS+      +           R E
Sbjct: 183 VIRMTRNDTKELGC-DEKLFKQVVKTTFNQRRKTLRNSIKPILGKDCPLTEDALFNKRPE 241

Query: 251 NISVEQYCKLANYISD 266
            +SVE++  L N + +
Sbjct: 242 QLSVEEFISLTNQVEE 257