Pairwise Alignments

Query, 461 a.a., DNA repair protein RadA from Enterobacter asburiae PDN3

Subject, 457 a.a., DNA repair protein RadA (RefSeq) from Shewanella loihica PV-4

 Score =  337 bits (864), Expect = 5e-97
 Identities = 188/457 (41%), Positives = 279/457 (61%), Gaps = 11/457 (2%)

Query: 6   KRAFVCNECGADYPRWQGQCSACHAWNTITEVRGVAASPSVARNERLSGYAGNAGVAKVQ 65
           K A+VC+ECG D+PRWQGQC+AC  WNTI+EVR   A  S      ++GYAG  G    +
Sbjct: 5   KTAYVCSECGQDFPRWQGQCNACGEWNTISEVRLAPAKSSAGS---VAGYAGAVGGGS-K 60

Query: 66  KLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLAEQMK 125
           KLS++   E  +  TG  E DRVL GG+  GS  +I G+PGAGK+T+L   + ++++ M 
Sbjct: 61  KLSEVEEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP 120

Query: 126 TLYVTGEESLQQVAMRAHRLGLPTG--NLNMLSETSIEQICMIAEEEQPKLMVIDSIQVM 183
           +LY T EESL Q   R +RL L     NL +++ET++E I    E +Q K  VIDSIQ +
Sbjct: 121 SLYCTAEESLSQFKNRVNRLRLDCNEENLYLMAETNVEAIIAELEAKQVKFAVIDSIQAV 180

Query: 184 HMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCSVM 243
                  SPGS +QV+ +A  LT++ K   V + +V HV K+   AGP+ L H +DC   
Sbjct: 181 VTDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH 240

Query: 244 LDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEITSGSSVMV 303
           L+ + D + RTLR++KNRFG V+ +G+F MTE+G+  V NPS IFLS     + G+++  
Sbjct: 241 LECN-DGQVRTLRANKNRFGDVDTVGIFRMTERGMLSVDNPSEIFLSGSTTESPGAAITC 299

Query: 304 LWEGTRPLLVEIQALVDVSMMGNPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFVNV 363
           + +G R LL+EIQ L   +    P+RV VGL  NR+ +L  +L +H   ++   D + N+
Sbjct: 300 IRKGNRNLLLEIQCLTTEAEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIY-HDTYFNL 358

Query: 364 VGGVKV--TETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 421
           VGG+K+  +ET  DLAL+ A++SSL +  +P+   + GE+ L G++RP+ SG  R+ EA 
Sbjct: 359 VGGLKIDESETCIDLALVAALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAV 418

Query: 422 KHGFRRAIVPAANVPKKIPE-GMQVFGVKKLADALNV 457
           +HGF    +P  N  K +   G ++  +K + + L +
Sbjct: 419 QHGFTEIFIPFRNYHKSMEGLGAKINPIKTIHELLEL 455