Pairwise Alignments

Query, 814 a.a., ribonuclease R from Enterobacter asburiae PDN3

Subject, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

 Score = 1010 bits (2612), Expect = 0.0
 Identities = 504/811 (62%), Positives = 617/811 (76%), Gaps = 19/811 (2%)

Query: 4   DPFQEREAEKYANPIPSREFIIEHLTKREKPANREELAVELNIEGEEQIEALRRRLRAME 63
           DPF +REA+ Y NPIPSRE+I+E LT+   P NR +L   L +EGEEQ E LRRRLRAME
Sbjct: 8   DPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAME 67

Query: 64  RDGQLVFTRRQCYALPERLDLLKGTVIGHRDGFGFLRVEG---RKDDLYLSSEQMKMCIH 120
           RDGQLVFTRRQCYALPE+L+++KG VIGH+DG G++R EG   ++ D+ L   QM+  IH
Sbjct: 68  RDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTLIH 127

Query: 121 GDQILAQPLGADRKGRREARVVRVLVPKTSQIVGRYFTDAGVGFVVPDDSRLSFDILIPP 180
           GD +L QP G D++GR+E R+VR+L  +  QIVGR+F + G  +VVPDDSR+  DILIP 
Sbjct: 128 GDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPN 187

Query: 181 EEVMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNMGTTMAVDMALRTHEIPYIWPKA 240
           +   GARMG VVV+E+T R TR    +GK+VEVLG+NM   M   +A+RTH+IP+ WP  
Sbjct: 188 DLRAGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAE 247

Query: 241 VEEQIESLREEVPEESKVGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA 300
           VE+Q+  L EEVPEE+K GRVDLR+LPLVTIDGEDARDFDDAVYCE K+GGGWRLWVAIA
Sbjct: 248 VEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVAIA 307

Query: 301 DVSYYVRPHTPLDNEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS 360
           DVSYYVRP T LD EA +RG SVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT+S
Sbjct: 308 DVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS 367

Query: 361 TKGRLTGYKFYEAVMSSHARLTYTKVWHMLQGDQDLREQYAPLVKHIEELHNLYKTLDQA 420
             G+L+GYK YEAVM+SHARLTYTKV  +L+GD++LRE+Y  LV H+EELH +Y+ L  A
Sbjct: 368 ETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSA 427

Query: 421 REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAKEP 480
           R+ERG I FE+ E KFIFNA+R+IE IE   RNDAHKLIEECMILANI++A  VEKAKE 
Sbjct: 428 RDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEA 487

Query: 481 ALFRIHDKPTTEAITSFRSVLAELGLELPGGNKPEPRDYAELLESIGDRPDAEMLQTMLL 540
           AL+R+H+ P  E +T FR  L ELGL+L GG +P P DYA L++ IG+RPD E++QTMLL
Sbjct: 488 ALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLL 547

Query: 541 RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAQEQG-HKGNTTET 599
           RSMKQA+Y+ +N GHFGLAL+ YAHFTSPIRRYPDL LHRAIKYL+A+++G ++   T T
Sbjct: 548 RSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWTPT 607

Query: 600 GGYHYSMEEMLQLGQHCSMAERRADEATRDVADWLKCDFMLDQVGNVFKGVIASVTGFGF 659
           GGYHYS ++M   G+ CSM ERRAD+ATR+V+DWLKC++M D VG   +GV+A+VT FGF
Sbjct: 608 GGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGF 667

Query: 660 FVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVKVEAVNMDDRK 719
           FVRL EL IDGLVH+S+L NDYY +D +GQRL+GES G  YRLGD V+VKV AVN+DDR+
Sbjct: 668 FVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQ 727

Query: 720 IDFSLISSERAPRNVGKTERER---AKKTGNGKPGGGKRRQAGK-----------KVNFE 765
           IDF L+ + R  R  GKT ++R   A+    GK     +   GK           +    
Sbjct: 728 IDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGKSPTKSELKPQVEATRR 787

Query: 766 PDSAFRGEKKQKPKAAKKEARSAKKPSAKTQ 796
           PDS  R  K +K KA KK    A+K S K +
Sbjct: 788 PDSEGR-SKPKKTKAPKKRKDQARKKSGKVR 817