Pairwise Alignments

Query, 631 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 556 a.a., Superfamily II DNA and RNA helicases from Pseudomonas stutzeri RCH2

 Score =  457 bits (1177), Expect = e-133
 Identities = 257/564 (45%), Positives = 356/564 (63%), Gaps = 23/564 (4%)

Query: 8   FADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLNN 67
           FA LG+ + +L A++ +GYE+PSPIQ++ IP +L G D++G AQTG+GKTAAF+LP+L+ 
Sbjct: 8   FAALGIHSAVLAAISAVGYEEPSPIQSQAIPVILGGHDMIGQAQTGTGKTAAFALPILSK 67

Query: 68  IDPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQGPQ 127
           IDP  +  Q L+LAPTRELA+QVA A   +SK M G+ VVA+YGG     QL+A+RQG Q
Sbjct: 68  IDPARKEVQALILAPTRELALQVATAFETYSKQMPGLTVVAVYGGAPMGPQLKAIRQGAQ 127

Query: 128 IVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDGHQTALFS 187
           ++V TPGRL+DHL R +  LS +  LVLDEADEML++GF++D+E I   +P+  QT LFS
Sbjct: 128 VIVATPGRLVDHLSRNSGLLSTIRFLVLDEADEMLKLGFMDDLEVIFEAMPESRQTVLFS 187

Query: 188 ATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFLEAEDFDA 247
           AT+P +IR I ++ +++PQ ++I +   T   I Q++  V+  +K +A++R LE EDFDA
Sbjct: 188 ATLPHSIRAIAEKHLREPQHIKIAAKTQTVARIEQAHLMVHADQKIQAVLRLLEVEDFDA 247

Query: 248 AIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAAR 307
            I FVRTK ATL++A ALE  GY +AALNGD+ Q  RE+ +E LKDGRLDI++ATDVAAR
Sbjct: 248 LIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIESLKDGRLDIVVATDVAAR 307

Query: 308 GLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMKLT 367
           GLDV RI+ V N D+P D ESYVHRIGRTGRAGR GRALL V  RERR+L+ IER     
Sbjct: 308 GLDVARITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVTPRERRMLQVIERVTNQK 367

Query: 368 IPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELDMETLAAA 427
           + EA LPNA  +   R++K    +   +  ++      L   +  +          LAAA
Sbjct: 368 VAEARLPNAQQVLDARIKKLTNSLAPLVADAEATHGELLDKLVADIG----CSPRALAAA 423

Query: 428 LLKMAQGERSLI---VPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPRGDRPERGGED 484
           LL+ A   ++L    V  + P+ P    R+R +                R DRPER G+ 
Sbjct: 424 LLRKATNGQALTLAEVEREQPLVPTSSPRERTE----------------RSDRPERSGDR 467

Query: 485 RPRRERRDAGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELP 544
             R     A      R  +G  DG+  R+++GAI NEG ++   IG I++  S S +ELP
Sbjct: 468 ERRAPVPLAEGRARCRTPLGARDGIAARNLLGAILNEGGLAREAIGRIQVRDSFSLVELP 527

Query: 545 KGMPGEVLQHFTRTRILNKPMNMQ 568
           +     +L     TR+  K + ++
Sbjct: 528 EDGLERLLGKLKDTRVGGKQLKLR 551