Pairwise Alignments

Query, 631 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 799 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score =  304 bits (778), Expect = 1e-86
 Identities = 186/487 (38%), Positives = 267/487 (54%), Gaps = 57/487 (11%)

Query: 7   TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLSGRDVLGMAQTGSGKTAAFSLPLLN 66
           TFADLGL    L A+ ++GY  P+PIQ + IP++  GRDVLG+AQTG+GKTA+F+LP+++
Sbjct: 2   TFADLGLSPETLRAIEEVGYTTPTPIQVQAIPYVQMGRDVLGIAQTGTGKTASFTLPMID 61

Query: 67  NI---DPDLRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALR 123
            +       R P+ L+LAPTRELA QV+E  T + K+ + +++  L GG+  + Q + L 
Sbjct: 62  ILASGKAKARMPRSLILAPTRELATQVSENFTLYGKYQK-LSMALLIGGESMNEQQKVLD 120

Query: 124 QGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPDGHQT 183
           +G  +++ TPGRL+D  +RG++ L  +  LV+DEAD ML MGFI DVE I+A +P   QT
Sbjct: 121 RGVDVLIATPGRLIDLFERGSILLRDVKVLVIDEADRMLDMGFIPDVERIVALLPKIRQT 180

Query: 184 ALFSATMPEAIRRITKRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFLEAE 243
             FSATM + IRR+   F+ +P+EVRI+ +      + Q+   V    K EAL + L  E
Sbjct: 181 LFFSATMDKEIRRLADAFLMNPKEVRIEPTQKVAETVEQALIMVKASEKREALRQLLRRE 240

Query: 244 DFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDILIATD 303
               A IF   K     + ++L   G++  AL+GDM Q +R + LE+ K   + +++ +D
Sbjct: 241 TVTNAFIFCNRKRDVDVLYKSLSGHGFDILALHGDMPQYVRTERLEKFKRAEVQLMVCSD 300

Query: 304 VAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERT 363
           VAARG+DV  +S V N+D+P   E Y+HRIGRTGRAGR GRA       + + LR IE  
Sbjct: 301 VAARGIDVTEVSHVFNFDVPTHPEDYIHRIGRTGRAGRLGRAYTLATPEDAKYLRAIENL 360

Query: 364 MKLTIPEADLPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLSQIQPVAEGEELDMET 423
           +  TIP                        QLE SD+         ++ VA         
Sbjct: 361 LGKTIPP---------------------DPQLELSDV--------AVEDVA--------- 382

Query: 424 LAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRGDRNDRNDRGPRGDRPERGGE 483
                L +A+ +R          RPKR  + R +R  RR  R   +   PR   PER   
Sbjct: 383 -----LAVAEDDR----------RPKRGGKGRPERGARRSGRGSADAERPRPLAPERAAN 427

Query: 484 DRPRRER 490
           D+   ER
Sbjct: 428 DQAPVER 434