Pairwise Alignments

Query, 292 a.a., Collagenase and related proteases from Enterobacter asburiae PDN3

Subject, 289 a.a., hypothetical peptidase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  259 bits (661), Expect = 6e-74
 Identities = 143/293 (48%), Positives = 193/293 (65%), Gaps = 11/293 (3%)

Query: 1   MKYSLGPVLYYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRATKVGDWLDMAKGLAGS 60
           MK SLGP+LY W K+ + DFYQQ A S   ++YLGEAVCS+RR  K GD+L++AK L  +
Sbjct: 1   MKISLGPLLYCWEKQQVIDFYQQVANSQIPLVYLGEAVCSRRRELKWGDYLELAKMLKSA 60

Query: 61  GKQVVLSTLALVQASSELGELKRYVENGEFLLEASDLGVVNMCAERKLPFVAGHALNCYN 120
           GK VVLSTLAL++A SE  ELKR V+NGEF++EA+D+  V +  E K PFV G ++N YN
Sbjct: 61  GKDVVLSTLALIEAPSEYTELKRQVDNGEFMIEANDMAAVYLAKEHKQPFVCGASINNYN 120

Query: 121 AVTLRLLLKQGMTRWCMPVELSRDWLANLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC 180
             +L +L + GM R+ MPVELS+ WL+ ++++      +  FEVEVL +G+LPLA+SARC
Sbjct: 121 RASLDILQRLGMQRFVMPVELSKTWLSQVVDK------KPSFEVEVLGHGYLPLAHSARC 174

Query: 181 FTARSEDRPKDECETCCIKYPNGRSMLSQENQQVFVLNGIQTMSGYVYNLGNELASMDGL 240
           FTAR     KD CET C +Y  G    +QE Q +  LNGIQT S    +L +E+++M  +
Sbjct: 175 FTARHSQLAKDSCETVCRQYSKGLLAQTQEAQPLLRLNGIQTQSASCVDLRSEISAMVKI 234

Query: 241 -VDMVRLSPLDTGVFAMLDAF-RANENGA--SPLPLTANSDCNGYWRRLAGLE 289
            VD+ R+SP      A  DA   A  +GA  +  PL ++  CNGYW   AGL+
Sbjct: 235 GVDVFRVSPSSLACIAKADALVEALNSGAMDAQYPL-SDEHCNGYWFGEAGLK 286