Pairwise Alignments

Query, 331 a.a., Collagenase and related proteases from Enterobacter asburiae PDN3

Subject, 403 a.a., U32 family peptidase from Methanococcus maripaludis JJ

 Score =  133 bits (334), Expect = 9e-36
 Identities = 95/298 (31%), Positives = 145/298 (48%), Gaps = 38/298 (12%)

Query: 1   MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVNFVHQHRRK 60
           +ELL PA +L  L  A  NGAD+VY GLK+   +      NF   +L E +N  H   ++
Sbjct: 2   VELLAPARDLSGLITAFNNGADSVYCGLKE--MSMRATAKNFERNELIEGINLAHDANKR 59

Query: 61  LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA 120
           +++  NT  + D        ++ A     DA+I+ D+  +  A E    +E HVSVQ + 
Sbjct: 60  VYLCTNTVVYEDDVLNVNEILEFAKSAEVDAVIVNDIGAMSLADEL--GLEIHVSVQNNI 117

Query: 121 TNEEAVRFYHQHFDVARVVLPRVLSIHQVKQLA---RVTPVPLEV--FAFGSLCIMAEGR 175
           TN +   F+ +     RVVL R L++ Q+KQ+    ++  V LE+  F  G+LC    GR
Sbjct: 118 TNSKTAEFFSKF--AKRVVLSRELTLTQIKQIKENLKLNKVDLELEGFIHGALCTAMSGR 175

Query: 176 CYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLIDRYQDGENAGYPTLCKGR 235
           CYLSSYL   + N      P R   W+             L++ + DG    +  +C+G+
Sbjct: 176 CYLSSYLFNRNANCGDCLQPCR-RSWK-------------LVNEHADGT---HELICEGK 218

Query: 236 YLVDGERYHALEEPTSLNTLELLPELLAANIASVKIEGRQRSPAYVSQVAKVWRQAID 293
           YL+          P  L  +E +PE++       KIEGR ++  YV +  K +R AID
Sbjct: 219 YLL---------SPKDLCMIEHIPEMIDV-FDCFKIEGRAKNVDYVMRATKTYRNAID 266