Pairwise Alignments

Query, 326 a.a., pilus retraction protein PilT from Enterobacter asburiae PDN3

Subject, 345 a.a., type IV pili twitching motility protein PilT from Vibrio cholerae E7946 ATCC 55056

 Score =  305 bits (780), Expect = 1e-87
 Identities = 165/327 (50%), Positives = 217/327 (66%), Gaps = 3/327 (0%)

Query: 1   MDVEEIVALSVKHNVSDLHLCSDSPPRWRRLG---RLEPAPFPPPDVGALLKAWLNDEQQ 57
           MD+ E++  SVKHN SDLHL +  PP  R  G   +L    F   DV  L+   +ND Q+
Sbjct: 1   MDIAELLEFSVKHNASDLHLSAGVPPMVRIDGEVRKLGVPAFTHSDVHRLIFEIMNDAQR 60

Query: 58  GTWWAKGQVDFAATVTGGQRLRGSAFKQMSGISVTLRLLPRSCPQLSSLGAPRAIPELLC 117
             +  K +VDF+  +    R R +AF Q  G S   R +P   P L  L AP    ++  
Sbjct: 61  SEYEEKLEVDFSFELPNVGRFRVNAFHQARGCSAVFRTIPTVIPTLEQLDAPEIFSKIAN 120

Query: 118 NDAGLILVTGATGSGKSTTLAAMVDFLNHHADGHILTLEDPVEFIYQSERCLIQQREIGQ 177
            + GL+LVTG TGSGKSTTLAAMV+++N H + HILT+EDP+EF++ + +CLI QRE+ +
Sbjct: 121 YEKGLVLVTGPTGSGKSTTLAAMVNYVNAHHNKHILTIEDPIEFVHSNNKCLINQREVHR 180

Query: 178 HSPSFAEALRSALRQDPDVILLGELRDSETIRLALTAAETGHLVLATLHTRGASQAIERL 237
            + SF  ALRSALR+DPDVIL+GELRD ETI LALTAAETGHLV  TLHT  A++ I+R+
Sbjct: 181 DTHSFKNALRSALREDPDVILVGELRDQETISLALTAAETGHLVFGTLHTSSAAKTIDRI 240

Query: 238 VDTFPAQEKDPVRNQLAGSLRAVLAQKLLPDLQGGRVALYELLVNTAAAANLIREGKTWQ 297
           +D FP  +KD VR+ L+ SLRAV+AQKLL  + GGRVA +E+++ T A  NLIRE K  Q
Sbjct: 241 IDVFPGSDKDMVRSMLSESLRAVIAQKLLKRVGGGRVACHEIMLATPAIRNLIREDKVAQ 300

Query: 298 LPGIIQTGQQAGMQNFDQSLAERRAQG 324
           +  IIQTG   GMQ  +Q+  +  A+G
Sbjct: 301 MYSIIQTGAAHGMQTMEQNAKQLIARG 327