Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Enterobacter asburiae PDN3

Subject, 328 a.a., Phage integrase (NCBI) from Rhodospirillum rubrum S1H

 Score =  204 bits (520), Expect = 2e-57
 Identities = 133/298 (44%), Positives = 172/298 (57%), Gaps = 9/298 (3%)

Query: 9   EQFLDALWLEKNLAENTLSAYRRDLTMLVEWLAHRGLSLASAQRDDLQALLGERIAGGYK 68
           E FL+ +  E+  A  T+ AY RDL     +L  +GL   +  R  L+A L    A G  
Sbjct: 23  EAFLEMMLAERGAARRTVEAYGRDLRDYAAFLREKGLDGLTVSRPTLRAYLATMAAAGLA 82

Query: 69  ATSSARLLSAMRRLFQHLYREKIREDDPSALLASPKLPQRLPKDLSEAQVERLL-QSPAV 127
             S AR LS +R+    L  E  R DDP+  L SP+L + LP+ LSEA+V+ LL  + A 
Sbjct: 83  PRSQARKLSCLRQFHGFLVSEGRRPDDPTIGLDSPRLGRPLPRVLSEAEVDALLVAAEAG 142

Query: 128 DLPLELRDKAMLELLYATGLRVSELVGLTMSDVSLRQGVVRVIGKGNKERLVPLGEEAVY 187
           +    LR + +LELLY+TGLRVSELV L +S  +     + V GKG+KERLVPLG  A  
Sbjct: 143 EGARGLRARVLLELLYSTGLRVSELVSLPLSVANRDPETILVRGKGDKERLVPLGLPARA 202

Query: 188 WLETYLEHGRPWLLNGTSID------VLFPSQRAQ-QMTRQTFWHRIKHYATLAGIDSEK 240
            L  +L   RP  L  +          LFPS  A+  +TR  F   +   A  AGID  +
Sbjct: 203 ALRDWLI-ARPTTLPASGAARRRADRFLFPSSAAEGHLTRDGFAKMLGELALRAGIDPAR 261

Query: 241 LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298
           +SPHVLRH FA+H+L HGADLR VQ LLGH+D++TTQIYTHV  +RL  L +  HP A
Sbjct: 262 VSPHVLRHCFASHMLAHGADLRGVQTLLGHADIATTQIYTHVLDDRLTTLVRTAHPLA 319