Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Enterobacter asburiae PDN3

Subject, 311 a.a., Probable integrase/recombinase from Mycobacterium tuberculosis H37Rv

 Score =  204 bits (518), Expect = 3e-57
 Identities = 132/310 (42%), Positives = 185/310 (59%), Gaps = 15/310 (4%)

Query: 3   KDLAL-IEQFLDALWLEKNLAENTLSAYRRDLTMLVEWLAHRGLS-LASAQRDDLQALL- 59
           K LAL ++ +LD L +E+ +A NTLS+YRRDL    + L  RG++ LA     D+   L 
Sbjct: 2   KTLALQLQGYLDHLTIERGVAANTLSSYRRDLRRYSKHLEERGITDLAKVGEHDVSEFLV 61

Query: 60  ----GERIAG--GYKATSSARLLSAMRRLFQHLYREKIREDDPSALLASPKLPQRLPKDL 113
               G+  +G     A S+AR L A+R L +    E + E D +  +  P   +RLPK L
Sbjct: 62  ALRRGDPDSGTAALSAVSAARALIAVRGLHRFAAAEGLAELDVARAVRPPTPSRRLPKSL 121

Query: 114 SEAQVERLLQSPAVDLP----LELRDKAMLELLYATGLRVSELVGLTMSDVSLRQGVVRV 169
           +  +V  LL+    D P    L LR++A+LELLY+TG R+SE VGL + D+      V +
Sbjct: 122 TIDEVLSLLEGAGGDKPSDGPLTLRNRAVLELLYSTGARISEAVGLDLDDIDTHARSVLL 181

Query: 170 IGKGNKERLVPLGEEAVYWLETYLEHGRPWLL-NGTSIDVLFPSQRAQQMTRQTFWHRIK 228
            GKG K+RLVP+G  AV+ L+ YL  GRP L   G     +F + R  +++RQ+ W  ++
Sbjct: 182 RGKGGKQRLVPVGRPAVHALDAYLVRGRPDLARRGRGTAAIFLNARGGRLSRQSAWQVLQ 241

Query: 229 HYATLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLR 288
             A  AGI +  +SPH+LRH+FATHLL  GAD+RVVQ LLGH+ ++TTQIYT V    LR
Sbjct: 242 DAAERAGI-TAGVSPHMLRHSFATHLLEGGADVRVVQELLGHASVTTTQIYTLVTVHALR 300

Query: 289 QLHQQHHPRA 298
           ++    HPRA
Sbjct: 301 EVWAGAHPRA 310