Pairwise Alignments

Query, 298 a.a., tyrosine recombinase XerD from Enterobacter asburiae PDN3

Subject, 310 a.a., site-specific tyrosine recombinase XerC from Marinobacter adhaerens HP15

 Score =  205 bits (522), Expect = 9e-58
 Identities = 113/292 (38%), Positives = 174/292 (59%), Gaps = 5/292 (1%)

Query: 8   IEQFLDALWLEKNLAENTLSAYRRDLTMLVEWLAHRG-LSLASAQRDDLQALLGERIAGG 66
           + +F+  L  EK  +  T  +Y RDL  L +WL   G ++       DL+  +      G
Sbjct: 9   LAEFIRHLASEKRHSPRTCDSYHRDLLRLADWLGRSGFVAWQRVTNHDLRRYVATLSREG 68

Query: 67  YKATSSARLLSAMRRLFQHLYREKIREDDPSALLASPKLPQRLPKDLSEAQVERLLQSPA 126
               S AR LSA RR +Q L REK+  D+P+  + +PK  +RLP+     Q+  LL    
Sbjct: 69  LSGRSIARHLSATRRFYQFLLREKLASDNPALDIRAPKSGRRLPRVADVDQLNHLLDGQP 128

Query: 127 VDLPLELRDKAMLELLYATGLRVSELVGLTMSDVSLRQGVVRVIGKGNKERLVPLGEEAV 186
            D PLE+RD  M EL+Y++GLR++EL  L +  V +R G VRV+GKG KERL+P+G +A+
Sbjct: 129 DD-PLEVRDLCMFELMYSSGLRLAELASLDLDTVDVRSGEVRVMGKGGKERLLPVGRKAI 187

Query: 187 YWLETYLEHGRPWLLNGTSIDVLFPSQRAQQMTRQTFWHRIKHYATLAGIDSEKLSPHVL 246
             ++ ++ +      +G +   LF SQR ++++ ++   R+  +    G D +KL PH+L
Sbjct: 188 AAIQAWVPYRAALANDGEA--ALFVSQRGERLSHRSIQARLSRWGISRGAD-QKLHPHLL 244

Query: 247 RHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA 298
           RH+FA+H+L    DLR VQ LLGH+D++TTQ+YTH+  + L +++ Q HPRA
Sbjct: 245 RHSFASHMLESSGDLRAVQELLGHADIATTQVYTHLDFQHLARVYDQSHPRA 296