Pairwise Alignments

Query, 1180 a.a., DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1223 a.a., exodeoxyribonuclease V, beta subunit (RefSeq) from Shewanella loihica PV-4

 Score =  721 bits (1861), Expect = 0.0
 Identities = 477/1200 (39%), Positives = 674/1200 (56%), Gaps = 58/1200 (4%)

Query: 6    ESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFPRPLSVEELLVVTFT 65
            ++LDPL LPL G RLIEASAGTGKT+TIA LY+RLLLG    A    PLS E++LVVTFT
Sbjct: 4    QTLDPLSLPLSGTRLIEASAGTGKTYTIAGLYVRLLLGDSQRA----PLSCEQILVVTFT 59

Query: 66   EAATAELRGRIRSNIHELRIACLRQSTDNPLYASLLEEIAD--KQQAAQWLLLAERQMDE 123
             AAT ELR RIR  I     A L    D+PL  +L  E     + QA + L LA + +DE
Sbjct: 60   NAATQELRDRIRKKIQLAYRAFLGMEVDDPLINTLYSEAEPEARSQALKRLDLALKSLDE 119

Query: 124  ASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWRRHCYPLQRDIAEAV 183
            A++FTIHGFCQR+LS  AFES +LFE +   D+S   + A  DFWR  CYPL   +A+ +
Sbjct: 120  AAIFTIHGFCQRILSDMAFESSLLFESEFTLDDSEYLHHAVRDFWREACYPLPGYLAQII 179

Query: 184  HALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIARIADIKQKWIESVGEI 243
               +  P+ L + +   L      +   P A   +A R  + ++R+  I  +  ++  E+
Sbjct: 180  SNKFSDPDGLTKQLRPLLGANQASVSPTPEAFSQVAERLSQSLSRLRLIWPRERDATLEL 239

Query: 244  DVIIENSGIDRRKFNRGNQG--KWIDKISAWAQEETRGYQLPD--ALEKFSRRFLVERTK 299
               +  +G    +F + +QG  K     +A      +   LPD   L   +   L     
Sbjct: 240  LKALPLNGT---RFGKKDQGYPKLETLFAAMDNWAAQPLSLPDNKVLGALALGGLKLNKG 296

Query: 300  ADGIVPEH-PLFVAIETLLAEPLTLNDLMITRAMTEIRDAVAREKRRRGELGFDDMLSRL 358
             +   PE  PL   IE +     TL    +  A   I+   A +K+ +     DD+L  L
Sbjct: 297  GESPTPEQAPLLAHIERVTETIDTLVPSFLYGARDGIKARFAAQKQLKNLRTPDDLLIAL 356

Query: 359  DAALCSENGE--ALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWR-QQPGT----ALLL 411
              AL  E  +  ALA AI  RFP+A+IDEFQDTDP QY+IF  I++ QQ  T     LL+
Sbjct: 357  ADALSEETDQEQALARAIAKRFPIALIDEFQDTDPLQYQIFSSIYQGQQVSTDSDLGLLM 416

Query: 412  IGDPKQAIYAFRGADIFTYMKARSEVDAHYTLDTNWRSSPGMVESVNALFSRMDTAFMFR 471
            IGDPKQAIYAFRGADI TY+ AR + + HY+LDTN+RSS  M+E+VN LFSR D  F+ +
Sbjct: 417  IGDPKQAIYAFRGADIHTYIHARGQTENHYSLDTNYRSSQAMIEAVNQLFSRSDDPFISQ 476

Query: 472  EIPFQPVKFAEKNASLRFEFNGETQPAMNFWLLDGE---GYGVADYQNAMAQHCAAQIRD 528
             IPF+ VK + + A  R         A+   LL  +   G   A  ++ +A+  A +I  
Sbjct: 477  AIPFELVKASPEAAEKRLVEKVPQTSALRLKLLGEDPNAGLNKASARSQLAEDAANEIAR 536

Query: 529  WLSAGAHGKALLWKGDKPAPVKASDITVLVRSRQEAALIRDALTLLNIPSVYLSNRDSVF 588
             L+    G+ L  K DKP  +KA DI VLVR R EAA I+ AL+   I +V+LS RDSVF
Sbjct: 537  LLNEAQRGECL--KQDKP--LKAKDIAVLVRDRNEAAYIKTALSSRGIGAVFLS-RDSVF 591

Query: 589  ETLEAQEMLWLLQAVLAPERESTLRSALASAMLGLNARDIDALNNDEAAWDAVVEEFVRY 648
            +TL A+E+  +L A+  P+ E  LRSA+A+A+LG +A+ I   N DE      +E F   
Sbjct: 592  DTLVAKELALVLLAIANPKDERALRSAMATALLGYDAQAIHGFNLDEDVRQQQLEAFDNL 651

Query: 649  REKWQKRGVMAMVRELMAQRHIAENMLATAGGERRLTDILHISELLQEAGTQLESEHALV 708
             + W KRG+M  +  L A   + E +L    G+RRLTD  H+ ELLQ+   +L+   AL+
Sbjct: 652  HQTWLKRGIMPCMMALAADTRLIERLLTADEGQRRLTDFRHLGELLQQKAMELDGISALL 711

Query: 709  RWLAQQIADPNSNSSSQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIA----NYRVQD 764
             W  Q + + +S   +Q +RLES+++LVQIVTIHKSKGLEYP+ +LPF++    + R   
Sbjct: 712  NWYQQTLIEVSSTEEAQ-LRLESEQNLVQIVTIHKSKGLEYPICFLPFVSLARDSRRKPA 770

Query: 765  QAFYHDRESFEAVLDLSNAESSLELAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRR 824
               YH++++   V D+  +E      +AE LAEDLRLLYVALTR V  C   VA   R  
Sbjct: 771  PMLYHEQDAL--VWDIDQSEEGWAKYKAENLAEDLRLLYVALTRPVLACYCYVANHSRFT 828

Query: 825  GEKTGESDFHLSALGRLIQ-HGEPKDAAGLRQCIESLCTEHVALH-IPSQPDNSRWQMPE 882
                  S    +A+G L+       + A ++   ++L +E +++  + S      +   +
Sbjct: 829  KRDGISSQLFETAIGYLLGIETNACEFADIQAAAQALASEAISVDLVESDAPKLDFDPID 888

Query: 883  LRDS-QLHARQVVRTIADDWRVTSYSGLQQHGQ------SIAQDLMPKLDVDAAGAGSVP 935
              D+ +L  R + R     WRV SYSGL +H         +  +  P+L+  A      P
Sbjct: 889  TADAVKLAPRPLNRRHEIPWRVGSYSGLVKHSAHEQISPGMGDEAFPELEQLA------P 942

Query: 936  AEPVLTPHQFPRGASPGTFLHSLFEELDFTQPVSE--EWVLKMLQSGGYDAQWQPVLTDW 993
                L+   F RGA+ G+FLH + E++DFT   +   + + K ++  G D++WQ +L  W
Sbjct: 943  DSEQLSRFSFERGANAGSFLHWVLEQIDFTLADTSLGDELPKAMERFGIDSEWQDMLHAW 1002

Query: 994  IRAVLHAPLTTQGISLNQLTAKDKQVEMEFYLPIASPLRAEALDALIREYDPLSAGCPPL 1053
               +LH PL   G+ L  L+   K VEMEFY+PI   L A  L+ L+ +Y   +A    L
Sbjct: 1003 YLDLLHTPLDGDGLRLASLSQAQKLVEMEFYMPIGK-LDAPGLNQLLSQYGYSAA----L 1057

Query: 1054 NFRQVQGMLKGFIDLVFRHEGRYYLLDYKSNWLGESSEAYTQDAMASAMQMHRYDLQYQL 1113
            NF  ++GMLKGFIDL F ++G++Y+ DYKSN LG+    Y + AM  A+  H YDLQY +
Sbjct: 1058 NFETLEGMLKGFIDLTFEYQGKFYIADYKSNHLGDHLSHYEKPAMLRAIAGHHYDLQYII 1117

Query: 1114 YTLALHRYLRHRMADYRYEDHFGGVIYLFLRGVDANDPRSGVFSTRPAAELIEKMDNLFA 1173
            Y+LALHRYL+ R+  Y+Y+ H GG  YLFLRG+ A+ P +GV+  +P   LI+ +D L +
Sbjct: 1118 YSLALHRYLKLRLPGYQYDQHVGGCYYLFLRGMSADSPSTGVYYDKPPLALIQALDTLLS 1177