Pairwise Alignments

Query, 1180 a.a., DNA helicase/exodeoxyribonuclease V, beta subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1234 a.a., exodeoxyribonuclease V, beta subunit from Marinobacter adhaerens HP15

 Score =  691 bits (1783), Expect = 0.0
 Identities = 477/1257 (37%), Positives = 683/1257 (54%), Gaps = 105/1257 (8%)

Query: 1    MTDTAESLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGLGGNAAFP-RPLSVEEL 59
            MT+   +LDPL L L G  LIEASAGTGKTFTIA LY+RL+LG G +   P + L    L
Sbjct: 5    MTNRNPNLDPLALTLNGSALIEASAGTGKTFTIAILYVRLVLGQGQSPDSPLQNLLPPNL 64

Query: 60   LVVTFTEAATAELRGRIRSNIHELR--IACLRQSTDNPLYASLLEEIADKQ--QAAQW-- 113
            LVVTFTEAAT ELR RIR+ + +     +      + P   +L+ ++ D+     A W  
Sbjct: 65   LVVTFTEAATKELRDRIRTRLTQAAEVFSDAPDEPNPPAETALIYQLRDESYPDPASWPE 124

Query: 114  ----LLLAERQMDEASVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESVLRYQACADFWR 169
                LLLA   MDEA+V TIH FC RMLS +AF+SG LF+  L  D+S L  +   D+WR
Sbjct: 125  CRKKLLLAAEWMDEAAVSTIHSFCNRMLSEHAFDSGSLFKLTLETDQSELLDEVARDYWR 184

Query: 170  RHCYPLQRDIAEAVHALWKGPEALLRAIDRYLQGEAPVIKSPPPADETLASRHEKIIARI 229
               YPL   + +   + WK P  L + +   +  + P+    PP  E++    ++++ R 
Sbjct: 185  TFVYPLPPALMDEALSHWKTPGDLRQGVRNLI--DDPLSLGTPP--ESVHQAIDQVVHRR 240

Query: 230  ADIKQK-----WIESVGEIDVIIENSGIDRRKFNRGNQG--KWIDKISAWAQEETRGYQL 282
             +  Q      W +   ++  ++ +    +R          K  D + AWA+ +    + 
Sbjct: 241  LEQSQSLKAHPWSQWRDDVIELLNDLNKSKRLHGASKNAMIKVWDLLVAWAESDDLLPEK 300

Query: 283  PDALEKFSRRF---LVERTKADGIVPEHPLFVAIETLLA----EPLTLNDLMITRAMTEI 335
             D+   F  +    L +  K D   P HP F AI  LL     +P   +D++   A   +
Sbjct: 301  IDSAAGFKNQTPEGLDKILKGDDSAPHHPAFDAIGALLDFSQNQPSAKSDIL-RHASHWM 359

Query: 336  RDAVAREKRRRGELGFDDMLSRLDAALCSENGEALAAAIRTRFPVAMIDEFQDTDPQQYR 395
             + +  EK++R E+GFDD+L+RLD AL    G+ LAA IR +FPVA+IDEFQDTDP QYR
Sbjct: 360  AERLESEKQKRSEMGFDDLLTRLDDALHGPRGDQLAATIRRQFPVALIDEFQDTDPVQYR 419

Query: 396  IFRRIWRQQ---PGTALLLIGDPKQAIYAFRGADIFTYMKARSEV-DAHYTLDTNWRSSP 451
            IF RI+       GT LL+IGDPKQAIY FRGADI+TY++AR  V +  YTL  N+RS+ 
Sbjct: 420  IFDRIYNVSGGDSGTCLLMIGDPKQAIYGFRGADIYTYLQARQGVKERTYTLGKNFRSAK 479

Query: 452  GMVESVNALFSRMDT-----AFMFREIPFQPVKF--AEKNASLR-FEFNGETQPAMNFWL 503
             MV +VN +F   D      AF+F +    P+ F   + N + R +  NGE QP++ FW 
Sbjct: 480  TMVAAVNRVFDHSDQNSRDGAFLFGKGDTSPLPFQGVDANGTKRSWSINGEVQPSLVFWT 539

Query: 504  LD-GEGYGVAD--YQNAMAQHCAAQIRDWLSAGAHGKALLWKGDKPA---PVKASDITVL 557
             + GE  GVA    +  MA+ CA++I   L+ G  G+A     D P+   PV   DI +L
Sbjct: 540  HESGEEEGVAKGAARADMAETCASEIARLLTLGQAGQAGFALPDNPSDLEPVAPKDIAIL 599

Query: 558  VRSRQEAALIRDALTLLNIPSVYLSNRDSVFETLEAQEMLWLLQAVLAPERESTLRSALA 617
            V +R EA+ +RDAL    I SVYLS+RDSV  + E+QE+L  L+A   P + + +R+ALA
Sbjct: 600  VNNRNEASAVRDALGQRRIKSVYLSDRDSVLTSRESQEILCWLRAFAEPRQLAYIRAALA 659

Query: 618  SAMLGLNARDIDALNNDEAAWDAVVEEFVRYREKWQKRGVMAMVRELMAQRHIAENMLAT 677
            +  LG +   ++ L  DE   +  +E F+ Y+++WQK+GV+ M+R  +    +   +L  
Sbjct: 660  TPTLGQSWHAMNQLLTDELVLEREIERFIGYQQQWQKQGVLPMLRTFLMDFEVPGQLLQR 719

Query: 678  AGGERRLTDILHISELLQEAGTQLESEHALVRWLAQQIADPNSNSSSQQMRLESDKHLVQ 737
              GERRLTDILHI+ELLQ+   QL+ EHALV    Q +   +     + +RLESD  LV+
Sbjct: 720  PDGERRLTDILHIAELLQQDSLQLDGEHALVHHYTQILRAADEEDEHRTLRLESDAGLVK 779

Query: 738  IVTIHKSKGLEYPLVWLPFIANYRVQD--QAF--YHDRESFEAVLDLSNAESSLELAEAE 793
            ++T+HKSKGLEYPLV+LPF   +R Q   QAF  YH+ E    V     +   +  A+ E
Sbjct: 780  VITVHKSKGLEYPLVFLPFGTAFRAQSEKQAFVRYHN-EQGRLVTVFDPSPDDVARADRE 838

Query: 794  RLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKTGESDFHLSALGRLI-QHGEPKDAAG 852
            RL ED+R  YVALTR+ +   +G A L           ++  S LG LI   G+ +    
Sbjct: 839  RLGEDIRKFYVALTRARFATWVGTAAL----------DNWQQSGLGYLIGSEGQSR---- 884

Query: 853  LRQCIESLCTEHVALHIP--SQPDNSRWQMPELRDSQLHARQVVRTIADDWRVTSYSGLQ 910
            +  C+  L      + I     PD++ +  P   ++   A    R   +DW + SYS ++
Sbjct: 885  ISDCLGKLAEGRAEIRITPLPDPDDTHYHGP-APEALGPAMVSSREAREDWWIASYSSIE 943

Query: 911  QHG-------------QSIAQDLMPKLDVDAAGAGSVPAEPVLTPHQFPRGASPGTFLHS 957
              G              +  Q+L+ +  +D     +  A      H FP+GA PGTFLH 
Sbjct: 944  YTGMTGTGIAFTGEVEDAQTQNLLEESTLDEEENPAQMANQ-RNQHNFPKGAGPGTFLHE 1002

Query: 958  L--------FEELDFTQPVSEEWVLKMLQSGGYDAQWQPVLTDWIRAVLHAPLT-----T 1004
            L        F+ +    P+  E + +   + G++ +W   L  W+ A++  PL+      
Sbjct: 1003 LLEWCTQQGFQRVVDNPPLLHEQLTRRCGTRGWN-EWVEPLVRWLLALISKPLSLDRAGA 1061

Query: 1005 QGISLNQLTAKDKQVEMEFYLPIASPLRAEALDALIREYDPLSAGCPPLNFRQVQGMLKG 1064
            + + L+ LT    + E+EF+   +  +    LD L+  +    A  P +   +  GMLKG
Sbjct: 1062 ETVCLSDLTT--LRPELEFWFE-SRNVSIRKLDELVTAHTLNRADRPRVEETRFNGMLKG 1118

Query: 1065 FIDLVFRHEGRYYLLDYKSNWLGESSEAYTQDAMASAMQMHRYDLQYQLYTLALHRYLRH 1124
            FIDLVF H GRYY+LDYKSN LGE + AYT  AM +A+   RYDLQY LY LALHR L+ 
Sbjct: 1119 FIDLVFEHNGRYYVLDYKSNTLGEDNSAYTDQAMGNAILDKRYDLQYVLYLLALHRLLKA 1178

Query: 1125 RMADYRYEDHFGGVIYLFLRGVDANDPRSGVFSTRPAAELIEKMDNLF-AASTEEVA 1180
            R+ DY Y+ H GG +YLFLRG+D++    G F+ +P   LIE++D LF   S  EVA
Sbjct: 1179 RLPDYDYDRHIGGAVYLFLRGIDSS--TGGAFTDKPPRALIEQLDALFDGESVAEVA 1233