Pairwise Alignments

Query, 606 a.a., DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 1539 a.a., conjugal transfer protein from Sinorhizobium meliloti 1021

 Score = 51.6 bits (122), Expect = 2e-10
 Identities = 110/445 (24%), Positives = 175/445 (39%), Gaps = 79/445 (17%)

Query: 151 DWQKVAAAVALTR--RISVISGGPGTGKTTTVAKLLAALIQLSSEQKCRIRLAAPTGKAA 208
           D ++V A   +TR   I+ + G  G GK+T    LLAA       +  R+  AA  GKAA
Sbjct: 392 DLEQVDAVRHVTRDNAIAAVVGLAGAGKST----LLAAARAAWEGEGRRVIGAALAGKAA 447

Query: 209 ARLTESLGGALQKLPLTREQLALFPNEASTLHRLLGAQPGSQRLRYHAGNPLHLDVLVVD 268
             L +S G  ++   L   +LA               + G ++L+         DVLV+D
Sbjct: 448 EGLEDSSG--IRSRTLASWELAW--------------ESGREQLQRG-------DVLVID 484

Query: 269 EASMIDLTMMSRLIDAL-PPHARVIFLGDRDQLASVEAGAVLGDICTYASLGYTAERAQE 327
           EA M+    M+R++ A+    A+ + +GD  QL  +EAGA    I     +G+ AE A  
Sbjct: 485 EAGMVSSQQMARVLKAVEDAGAKAVLVGDAMQLQPIEAGAAFRAIS--ERIGF-AELAGV 541

Query: 328 LARLTGCSLTSENHSLAGALRDSLCLLQKSYRFGSDSGIGQLAAAVNRGDRRTTTAVFDG 387
             +    +  +      G + + L    +  R        ++   +         A +  
Sbjct: 542 RRQRDAWARDASRLFARGKVEEGLDAYAQQGRIVETETRAEIVDRI--------VADWAN 593

Query: 388 TFTDIEKKSLQSGEEYQAMLDDALQGYQHFLTGVQQQSTP-------EQVIAAFGEYQLL 440
              D+ +KS   GE    +  D L    H    V++ +         E  +    E+Q  
Sbjct: 594 ARRDLLQKS-ADGEHPGRLRGDELLVLAHTNDDVRKLNEALRNVMIGEGALTGAREFQTA 652

Query: 441 CALREGPFGVRGLNDRLEQLLAQKRKINRTPHSRWYEGRPVMISRNDSTLGLFNGDIGIA 500
             LRE   G     DR+  L           ++R+ E R    +R      + NG +G  
Sbjct: 653 RGLREFAAG-----DRIIFL----------ENARFVEPR----ARRLGPQYVKNGMLGTV 693

Query: 501 LDCGQG-----LRVWFQMPDGSVKSFQPSRLPEHETAWAMTVHKSQGSEFNHAALILPTQ 555
           +  G       L V        V S    R  +H   +A T+HKSQGS  +   ++    
Sbjct: 694 VSTGDRRGDTLLSVRLDSGRDVVISQDSYRNVDH--GYAATIHKSQGSTVDRTFVL---- 747

Query: 556 LSPVITRELIYTAITRARQRLSLYA 580
            + ++ + L Y A+TR R R  LYA
Sbjct: 748 ATGMMDQHLTYVAMTRHRDRADLYA 772