Pairwise Alignments

Query, 606 a.a., DNA helicase/exodeoxyribonuclease V, alpha subunit (EC 3.1.11.5) from Enterobacter asburiae PDN3

Subject, 757 a.a., exonuclease V subunit alpha from Marinobacter adhaerens HP15

 Score =  423 bits (1088), Expect = e-122
 Identities = 289/711 (40%), Positives = 391/711 (54%), Gaps = 114/711 (16%)

Query: 4   QALLLDAVEQRLLRHLDVQFAMMVA------GE--EPAVMLAAAILSKDAGEGHVCLPLS 55
           ++LLL   +   +R LDV FA ++       GE  +P ++L AA++S   G GHVC+ L 
Sbjct: 50  ESLLLHWQQAEWIRALDVGFARLIRELSEEQGERPDPLLLLLAALVSHQVGRGHVCVDLG 109

Query: 56  RLAVDE----KMPPALQACFALLGDAVDWQE------------------ILLGSPAVSGA 93
            L  D      +PP       L        +                  IL  + AVS  
Sbjct: 110 NLLADAGHTLSLPPEESVQEPLTDSGTSEPDRPKPADVLALVTLPECLSILESACAVSDG 169

Query: 94  DTGTPMILVGERLYLNRLWRNELTVARFFSETNA-PLPCDEAQ------LRQTLDTLFTS 146
              TP++L G RLYL R WR E  +A       A P P  + +      L   LDTLF S
Sbjct: 170 SHTTPLVLNGTRLYLRRFWRYEQRIAAGIRHRLALPSPLADPESGPARTLSLALDTLFRS 229

Query: 147 DDATDWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQLSSE------QKCRIRL 200
            +  D+QK+A A+A     +VI+GGPGTGKTTTV  LLAAL  ++ E      +K RIRL
Sbjct: 230 SEPVDYQKLACALAARNHFAVITGGPGTGKTTTVVNLLAALQAVAGESPERAGRKYRIRL 289

Query: 201 AAPTGKAAARLTESLGGALQKLPLTR----EQLALFPNEASTLHRLLGAQPGSQRLRYHA 256
           AAPTGKAAARL ES+GGA+ +LPL        L   P   +TLHRLLG++P +++ R++ 
Sbjct: 290 AAPTGKAAARLNESIGGAVSRLPLAELPGNVDLNDIPTRVTTLHRLLGSRPDTRKFRHNR 349

Query: 257 GNPLHLDVLVVDEASMIDLTMMSRLIDALPPHARVIFLGDRDQLASVEAGAVLGDICTYA 316
            NPL +D+LV+DEASM+D+ +M+ + DALP +A++I LGD+DQLASV+AGAVLG++C  A
Sbjct: 350 DNPLLVDILVIDEASMVDVDLMASVFDALPANAQLILLGDKDQLASVDAGAVLGELCQRA 409

Query: 317 SLG-YTAERAQELARLTGCSLTSENHSLAGALRD-SLCLLQKSYRFGSDSGIGQLAAAVN 374
            L  YT E A+ LA + G  +        G   D ++ +L+KSYRF  DSGI   A AVN
Sbjct: 410 LLAHYTPETARWLAAMAGSEIPESLVDETGQPMDQAVAMLRKSYRFREDSGIRAFAEAVN 469

Query: 375 RG--DRRTTTAVFDGTFTDIEKKSLQSGEEYQAMLDDALQ-------------------- 412
               D      + +  F D+    L +G       +D L                     
Sbjct: 470 TNALDNAMLRQIREAEFDDV---ILLNGRSKSGDTEDTLDLVCRHAITGSPEAFRNAGQG 526

Query: 413 ------------GYQHFLTGVQ----QQSTPE--------QVIAAFGEYQLLCALREGPF 448
                       GY+H+L  +Q     +S+P         Q++ AF ++Q+LCALR+GP+
Sbjct: 527 RQVNGQSLPPPVGYRHYLERLQNHGLNESSPREDWDAMAVQLLEAFSDFQVLCALRKGPW 586

Query: 449 GVRGLNDRLEQLLAQKRKINRTPHSRWYEGRPVMISRNDSTLGLFNGDIGIAL------- 501
           GV GLNDR+ + L  ++ I+R     WYEGRPV+I+ ND  LGL NGDIGIA+       
Sbjct: 587 GVEGLNDRIARQLLAEKLISRA--EGWYEGRPVLITGNDYNLGLMNGDIGIAVNVPWDRT 644

Query: 502 DCGQ---GLRVWFQMPD--GSVKSFQPSRLPEHETAWAMTVHKSQGSEFNHAALILPTQL 556
           D G+    LRV F   D  G ++   PSRL + ET +AMTVHKSQGSEFNH  L+LP +L
Sbjct: 645 DTGEPRYTLRVAFPDSDTAGGIRWISPSRLQQLETVYAMTVHKSQGSEFNHTCLVLPDRL 704

Query: 557 SPVITRELIYTAITRARQRLSLYA-DERVLVQAIATRTERRSGLG-AIFES 605
           SPV+T+EL+YT ITRAR   SL A D  VL +A++ +  R SGL  A+ ES
Sbjct: 705 SPVLTKELVYTGITRARNWFSLIAGDIPVLREAVSQQVSRASGLALALVES 755