Pairwise Alignments

Query, 390 a.a., efflux pump membrane protein (multidrug resistance protein A) from Enterobacter asburiae PDN3

Subject, 406 a.a., HlyD family secretion protein from Vibrio cholerae E7946 ATCC 55056

 Score =  256 bits (654), Expect = 8e-73
 Identities = 150/394 (38%), Positives = 221/394 (56%), Gaps = 29/394 (7%)

Query: 2   SANAESTTPQQPGNKKGK-RKSALLLLTLLFIIIAVAYGIYWFLVLRHAEETDDAYVAGN 60
           S N+ ++  +  G +  + RK   L L    ++   +Y +YW  +      TD+AY A  
Sbjct: 11  SMNSNNSNTEFDGVRAAQSRKKGFLGLAAAIVVAGGSYALYWHFIGSRYISTDNAYAAAE 70

Query: 61  QVQIMAQVSGSVTKVWADNTDFVQKGDVLVTLDPTDAQQAFEKAQTALASSVRQTRQLMI 120
             ++   V G + +V   +T++V++GDVLV LD TDA+ A  +A+  LA + R+ R  + 
Sbjct: 71  IAEVTPAVGGIIAQVNVVDTEYVKQGDVLVQLDDTDARLALLQAEADLALAKRRVRSYLA 130

Query: 121 NSKQLQANIDVQ-------KTALAQAQSD-------LNRRVPLGTANLIGREELQHARDA 166
           N + L A ++ Q       K  L  AQ+D       L+RR  L  +  +  EEL +A+  
Sbjct: 131 NDEGLSAMVEAQEANEQRVKAQLKAAQADFERAKIDLSRREDLVRSGSVSGEELTNAKTG 190

Query: 167 VASAQAQLDVA--------------IQQYNANQAMVLGTSLENQPAVQQAATEVRNAWLA 212
            A AQA L+ A              I    AN A+   T++++ P V  A      A + 
Sbjct: 191 FAQAQANLNAAKAAMAQAQATKLSTIGSQKANAALTDNTTVDSNPEVLLAKARYEQAKID 250

Query: 213 LQRTKIVSPMTGYVSRRSVQPGAQISPTTPLMAVVPADNLWVDANFKETQLAHMRIGQTA 272
           L+RT I +P++G V++R VQ G ++    PLM VVP D+++VDANFKE +L  +++GQ  
Sbjct: 251 LERTVIRAPISGIVAKRQVQVGRRVQVGMPLMTVVPTDHIYVDANFKEVELRDVKVGQPV 310

Query: 273 TVVSDIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDAKQLAD 332
           T+ +D+YGDDV Y G V G   GTGSAFS++PAQNATGNWIKVVQRLP+RIELD K L  
Sbjct: 311 TLTADLYGDDVTYHGVVAGFSGGTGSAFSMIPAQNATGNWIKVVQRLPIRIELDPKDLQA 370

Query: 333 HPLRIGLSTLVTVDTANRDGQILASQVRSSPAYE 366
           +PL++GLS + T+DTA         Q R++   E
Sbjct: 371 YPLQVGLSMVATIDTAGTTDPQTLVQYRAAKVSE 404