Pairwise Alignments

Query, 594 a.a., diguanylate cyclase (GGDEF) domain from Enterobacter asburiae PDN3

Subject, 730 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  115 bits (288), Expect = 6e-30
 Identities = 68/172 (39%), Positives = 97/172 (56%), Gaps = 5/172 (2%)

Query: 416 NQRLRDALLEKALFDPLTGLRNRHHLEDTLQTQTAQAMRTGEPLSCMMIDIDHFKSINDR 475
           ++  ++ L + A  D LTGL NR    + L+ +  +  R G PL+ + ID+D FK +ND 
Sbjct: 539 HREAQERLRQLATTDGLTGLANRRRFLEALEHEVQRHRRYGTPLALISIDVDRFKRVNDT 598

Query: 476 FGHEAGDQVIKSVASIVQRAAHDNGLAFRYGGEEFLVLLPGADEPEAHACAQKIYNSVHE 535
           +GH  GD+V++++A I +    D     R GGEEF VLLP     EA A A+++   V  
Sbjct: 599 WGHAVGDEVLRALAGICRAEVRDVDTVGRIGGEEFAVLLPDTAPEEAMAVAERLRAGVEA 658

Query: 536 LSLRYGLTEIGP--VDVSIGIASYPQHAQTDNLLRAADVALYRAKELGRARI 585
             L   LT  GP  V +S+G+++ P     D LLR AD ALYRAK  GR R+
Sbjct: 659 APL---LTTAGPLTVTLSLGVSASPPCDGADTLLREADRALYRAKAGGRNRV 707