Pairwise Alignments

Query, 366 a.a., D-alanine--D-alanine ligase from Enterobacter asburiae PDN3

Subject, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

 Score =  156 bits (394), Expect = 9e-43
 Identities = 113/352 (32%), Positives = 174/352 (49%), Gaps = 31/352 (8%)

Query: 1   MAKQRVGIVFGGKSAEHEVSLQSAKNIVDAIDKS-RFDVVLLGIDKQGQWHVNDASQYLL 59
           M K  + ++ GG S+EHE+SL SA  I   ++ +  F V+ + + K+G +    A  YL 
Sbjct: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYL- 59

Query: 60  NAHDPAHIALNPSEVSVATVPGVVKGQLIDAGNAQALAQIDVVFPIVHGTLGEDGSLQGM 119
              D     LN  + S                       ID V P +HG  GE G +Q M
Sbjct: 60  ---DTNSATLNSDKASYP---------------------IDFVVPCIHGFPGETGDIQSM 95

Query: 120 LRMANLPFVGSDVLGSAACMDKDVAKRLLRDAGLNIAPFVTLTRANRDKHSFA-QISGEL 178
           L +A +P++G     SA   +K  +K       +   P++ LT+        A Q  G  
Sbjct: 96  LELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHW 155

Query: 179 GLPLFVKPANQGSSVGVSKVTSEAEFTQAVRLAFEFDHKVVVEQGIKGREIECAVLG-ND 237
           G  +FVK A QGSSVG  KVT+E +   A+  AF F  +V+VEQ +K RE+E +    N 
Sbjct: 156 G-SIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNG 214

Query: 238 FPQASTCGEVVL-NSDFYSYDTKYIDDKGAQVVVPAD-IDPAINDKIRAIAIRAYQTLGC 295
               S  GEV+     FYSY+ KY  +  A+ V+ A+ +     + I+  A R +  +  
Sbjct: 215 KLYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKL 274

Query: 296 CGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLSYPELITRLI 347
             ++R+D FLT E ++ +NE+NT PG T ISM+PK+ + +G  + E + + +
Sbjct: 275 RHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326