Pairwise Alignments

Query, 234 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component from Enterobacter asburiae PDN3

Subject, 617 a.a., ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  181 bits (459), Expect = 3e-50
 Identities = 102/234 (43%), Positives = 149/234 (63%), Gaps = 13/234 (5%)

Query: 6   VKDLQVRFGEKT-----------AVSAASFAIEKGETFSLIGESGCGKSTILRVLAGLQR 54
           V+DL  RF  K+           AV   SF +  GET +++GESGCGKST  R L  L  
Sbjct: 315 VRDLTTRFDVKSGIFGRVRQRVHAVEKVSFDLYAGETLAIVGESGCGKSTTGRSLLRLVD 374

Query: 55  EWNGRISILGDALRPGRRFE-GELRRNVQMVFQDPWASLHPNHTISRTLSEPLHIHGETQ 113
              G++   G  L    R E  +LRR++Q +FQDP+ASL P  T+  ++ EP+ +HG  +
Sbjct: 375 IAGGKVEFGGRDLAQLPRSELRQLRRDIQFIFQDPFASLDPRMTVGYSIMEPMLVHGMKE 434

Query: 114 IAEKVADAL-QQVGLSADAGKRYPHQLSGGQRQRVAIARALALRPQLLLLDEPTSALDMS 172
            A++  DAL  +VGL+ + G+RYPH+ SGGQRQR+ IARALAL P++++ DE  SALD+S
Sbjct: 435 GAQERVDALLTRVGLTPEHGQRYPHEFSGGQRQRICIARALALNPKIVIADESVSALDVS 494

Query: 173 VQAEILNLLNRLKAEHGMTYLLVSHDADVIAHMSDRAAFMAHGEIQRVFDREAM 226
           +QA+I+NL+  L+AE G++++ +SHD  V+  +S R A M  G+I  +  R A+
Sbjct: 495 IQAQIVNLMLDLQAELGISFIFISHDMAVVERISHRVAVMYLGQIVEIGPRRAI 548



 Score =  137 bits (345), Expect = 5e-37
 Identities = 87/234 (37%), Positives = 133/234 (56%), Gaps = 21/234 (8%)

Query: 4   VDVKDLQVRFG--EKT--AVSAASFAIEKGETFSLIGESGCGKSTILRVLAGLQREWNGR 59
           +DV  L VRF   E+T  AV   SF +++GET +++GESG GKS     +  L     G+
Sbjct: 8   LDVNHLSVRFSTSERTVDAVRDLSFHVDQGETLAIVGESGSGKSVSSLAIMRLIEHGGGK 67

Query: 60  ISI--LGDALRPGRRFEGELRRN----------VQMVFQDPWASLHPNHTISRTLSEPLH 107
           I+   +    R G+R +     N          + M+FQ+P  SL+P  T+   ++E + 
Sbjct: 68  IASGSMQFLRRSGQRLDLAQADNATMRSIRGAEIAMIFQEPMTSLNPVFTVGEQIAESIR 127

Query: 108 IHGETQIAEKVADALQQVGLSA--DAGK---RYPHQLSGGQRQRVAIARALALRPQLLLL 162
           +H     A   A+AL+ + +    +A +   R+PHQLSGG RQRV IA AL+ +P LL+ 
Sbjct: 128 LHQGLGRAAAQAEALRMLEMVRIPEAKRVLGRHPHQLSGGMRQRVMIAMALSCKPSLLIA 187

Query: 163 DEPTSALDMSVQAEILNLLNRLKAEHGMTYLLVSHDADVIAHMSDRAAFMAHGE 216
           DEPT+ALD+++QA+IL L+  L+ E  M  + ++HD  V+A ++DR   M  GE
Sbjct: 188 DEPTTALDVTIQAQILQLIRSLQQEMQMGVIFITHDMGVVAEVADRVVVMCRGE 241