Pairwise Alignments

Query, 226 a.a., type II secretion system protein J from Enterobacter asburiae PDN3

Subject, 221 a.a., type II secretion system protein GspJ from Vibrio cholerae E7946 ATCC 55056

 Score = 83.2 bits (204), Expect = 4e-21
 Identities = 58/201 (28%), Positives = 98/201 (48%), Gaps = 18/201 (8%)

Query: 1   MSKVQRQQGFTLLEIMIALAIFAVISILAWQTLDGAMRTSTASDEAATKVTALQRTYNLL 60
           +S  Q   GFTL+E+++A+AIFA +S+ A+Q L+   R++  S E   ++  LQR   ++
Sbjct: 7   VSSRQNMAGFTLIEVLVAIAIFASLSVGAYQVLNQVQRSNEISAERTARLAELQRAMVIM 66

Query: 61  SRDFYQQQARAPRNSGEVFVQQ------------QNGVEMTTLNGISGQVQLER-----V 103
             DF Q   R  R  GE   +Q            Q+G+    L   + Q Q  R     V
Sbjct: 67  DADFRQMALRQFRTDGEAPSEQILQWKESLLDSDQHGLLFVRLGWHNPQQQFPRGEVAKV 126

Query: 104 RWTLKDKRLWRNVWAAIDGPASAQPEDVPILSDVKEMKWRFWHEG-WQEKWTDIAHQPDG 162
            + L + RL R  W   D PA  Q    P+L+ V++   +F+ +G W ++W      P+ 
Sbjct: 127 GYRLFENRLERVWWRYPDTPAGQQGLISPLLTGVEDWAVQFYLQGEWSKEWVPTNALPEA 186

Query: 163 VELNLTMENGETWRWVFITPG 183
           V++ L +++      +++T G
Sbjct: 187 VKVTLRLKDYGEIERIYLTGG 207