Pairwise Alignments

Query, 368 a.a., Outer membrane protein (porin) from Enterobacter asburiae PDN3

Subject, 331 a.a., porin from Vibrio cholerae E7946 ATCC 55056

 Score = 76.6 bits (187), Expect = 9e-19
 Identities = 95/384 (24%), Positives = 144/384 (37%), Gaps = 70/384 (18%)

Query: 2   MKRNILAVVIPALLVAGAANAAEIYNKNGNKLDFYGKVNAEHDFVTSGDNTNNNDATY-- 59
           MK+  +AV + + +V+G+  AA +Y+  G  L   G++    DF    D     + T   
Sbjct: 1   MKKAAIAVAVLSAVVSGSTLAATVYDAEGTSLKVGGRLEFRGDF-NGNDKGEEIEGTMLN 59

Query: 60  ---AQIGFKGETQINDQLTGYGQWE----YRFLANQAENGAQTNKNRLAFAGLKAGDAGS 112
               ++   GET I   + G+G WE     +  A  +     T K R  + G+K GD GS
Sbjct: 60  KSRVRLNVAGETDIGAGMKGFGFWEAEQGVKSSAGTSTEQETTFKQRYMYVGMK-GDFGS 118

Query: 113 IDYGRNYGIVYDVESYTDMAPSFSGMTWGGNYVDNFMTSRSTGLLTYRNSNFFGL-VDGL 171
           + +GR       +   +D+          G +  +     S G     N+  +G   +  
Sbjct: 119 LSFGRQNTAGVQISDMSDI----------GTFTGDQKAFVSAGNEQINNTIAYGYDFESF 168

Query: 172 SLGVQYQGKNDRADVKTSNGDGVGYS------LGYDFGEGFGAIASYSNANRTLNQKADG 225
            L   Y   + +      N DG G S       G D G G+ A           N     
Sbjct: 169 KLKASYIADDQK------NADGYGLSGIYSAPFGLDIGLGYAA-----------NDLGTD 211

Query: 226 EGDKAEAWGVGLKYDANNIYLATTYAETRNTTRTGSNGDAGFANKTQNFEVVAQYQFDFG 285
           +G  A+    GL Y   ++Y   TY        TG   D      T   EV AQY+    
Sbjct: 212 KG-SADQIIAGLGYTMGDLYFGATYT-------TGDKDDKADTEFT-GIEVSAQYKITKE 262

Query: 286 LRPAISYVQTKGKDLAAVNGFSGGDADLAKFIQVGTTYYFNKNFNVWADYYIN-LLDKDS 344
            R   +Y Q + ++   V        D A F ++   Y F KNF  +  Y  N L DKD+
Sbjct: 263 FRLIAAY-QNQEEETKNVT------KDKADFFELTGRYDFTKNFRSYLAYKANGLDDKDA 315

Query: 345 DYAKAVGGLNGNDDMAAVGVTYQF 368
            Y          +D   +G+ Y F
Sbjct: 316 GYKV--------EDTIRLGLRYDF 331