Pairwise Alignments

Query, 263 a.a., ABC-type nitrate/sulfonate/bicarbonate transport system, permease component from Enterobacter asburiae PDN3

Subject, 265 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  397 bits (1021), Expect = e-115
 Identities = 196/259 (75%), Positives = 228/259 (88%)

Query: 5   SQKWLLRAAPWFLPVGIVALWQLASSTGWLSSRILPSPEGVVEAFWSLSVSGELWQHLAI 64
           SQ+ + R APW LPV ++A+WQL+ S GWLS+RILP+P  V+EA  +L  SGE+W HLAI
Sbjct: 6   SQRIVHRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVASGEIWTHLAI 65

Query: 65  SSWRAVIGFSIGGSIGLVLGLISGLSRWGERLLDTSIQMLRNVPHLALIPLVILWFGIDE 124
           S WRA IGF+IGG IGL LG I+GLS+WGERLLD+S+QM+RNVPHLALIPLVILWFGIDE
Sbjct: 66  SGWRAGIGFAIGGGIGLALGFITGLSKWGERLLDSSVQMIRNVPHLALIPLVILWFGIDE 125

Query: 125 SAKIFLVALGTLFPIYINTWHGIRNIDRGLVEMARSYGLSGFSLFIHVILPGALPSIMVG 184
           +AKIFLVALGTLFPIY+NT+HGIRNID  LVEM+RSYGLSGFSLF HVILPGA+PSI+VG
Sbjct: 126 TAKIFLVALGTLFPIYLNTYHGIRNIDPALVEMSRSYGLSGFSLFRHVILPGAMPSILVG 185

Query: 185 VRFALGLMWLTLIVAETISANSGIGYLAMNAREFLQTDVVVVAIILYALLGKLADVSAQW 244
           VRFALG MWLTLIVAETISA+SGIGYLAMNAREFLQTDVVV+AI+LYA+LGKLAD++A+ 
Sbjct: 186 VRFALGFMWLTLIVAETISASSGIGYLAMNAREFLQTDVVVLAIVLYAVLGKLADLAARG 245

Query: 245 LERSWLRWNPAYTLQEAKA 263
           LER  LRW+PAY   +  A
Sbjct: 246 LERVCLRWHPAYQTSKGGA 264



 Score = 22.7 bits (47), Expect = 0.008
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 163 LSGFSLFIHVILPGALPSIMVGV-RFALGLMWLT--LIVAETISANSGIGYLA 212
           LS     +H + P ALP +++ V + ++   WL+  ++ A +    +GI  +A
Sbjct: 3   LSASQRIVHRLAPWALPVLLLAVWQLSVSAGWLSTRILPAPSAVIEAGINLVA 55