Pairwise Alignments

Query, 684 a.a., Superfamily I DNA and RNA helicases from Enterobacter asburiae PDN3

Subject, 687 a.a., DNA helicase IV from Vibrio cholerae E7946 ATCC 55056

 Score =  394 bits (1012), Expect = e-114
 Identities = 253/695 (36%), Positives = 378/695 (54%), Gaps = 21/695 (3%)

Query: 1   MELKATSLGKRLAQHPYDRVVLLNAGVKVSGERHEYLIPFNQLLA-IHCKRGLVWGELEF 59
           M+L A    +    + Y +V L    + ++    E  IPF+     +  +RG+ WG L+F
Sbjct: 1   MQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERIPFHVWNGEVQIRRGVFWGTLQF 60

Query: 60  VL-PDDKVVR---LHGTEWAETQRFHHHLNALWQQWSQDMSVIAAQVLQQVLDDIAQSNA 115
              P++ V R   + G  W E + F H L A +Q W        +    +   ++++   
Sbjct: 61  FAHPEEGVQRSWLVQGLPWPECRHFAHQLVAHYQAWHNRQCEQLSLYFPRWQQELSRLKR 120

Query: 116 QHAWLTRQQTAGLQQKIRQALSALPFSVTRLDEFDNCRDAWHQCQAWLNDKDKSRLAHNQ 175
             ++L+         ++   L  +  ++    +  +    +     WL D   +    N+
Sbjct: 121 LPSFLSHSSVEAWVAQVYADLKLMDMTLHEAQK--HLPTVFDTLLPWLLDTSATLYERNK 178

Query: 176 AWTDAMLTQYADFFSTVESSPLNPAQARAVVNGEQSLLVLAGAGSGKTSVLVARAGWLLT 235
           AW +     +   FS  ESSPLN +Q  AV+  +   LVLAGAGSGKTSVL AR  +LL 
Sbjct: 179 AWLEIERANWTVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQ 238

Query: 236 TGEAVADQILLLAFGRKAAQEMDERIQER--LHTRDITARTFHALALHIIQQGSKKVPSI 293
           +  A  +QILL+AF R AAQEM ER++ +  L    +   TFH L L II +   K   +
Sbjct: 239 SHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRIINRVEGKTVIM 298

Query: 294 SKLENDAQARQALFI----KTWRQQCSEKKAQAKGWRQWLEEELSWEVPEGSFWQDDKLA 349
           S L ND++ +QA  I    + W    + K+ Q K   +W    L+ +   GS  ++ KL 
Sbjct: 299 SPLANDSKLKQAWCIDWLKRHWMTPTNFKRWQ-KHLAKWPIAYLAGDDELGSHVENPKLI 357

Query: 350 RRLGSRLDRWVSLMRMHGGTQAEMIESAPEAIRDLFSKRVKLMAPLLKAWKTALKEENAV 409
             L  +LD+   +       Q  +++          +  + L  P  +AW+  LK++N +
Sbjct: 358 AWLEKQLDQLAQMGLSKKELQERLVDHDDYP---RLNSELSLCWPCYQAWQQMLKDQNQI 414

Query: 410 DFSGLIHQAIIILEKGRFVSPWKHILVDEFQDISPQRAALLSALRAQNK-HTSLFAVGDD 468
           DF+ +I +A   +EKG+F SPWK I+VDE+QDISPQR  LL AL  QN+   +LFAVGDD
Sbjct: 415 DFNIMITRATEYVEKGKFRSPWKFIMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDD 474

Query: 469 WQAIYRFSGAQLSLTTAFHHYFGEGERSDLDTTYRFNSRIGEIANRFIQQNPHQLAKPLN 528
           WQ+IY+F+G+ + LTT F   F       LDTTYRFN +IG +ANRFIQQNPHQL K LN
Sbjct: 475 WQSIYQFAGSDVDLTTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLN 534

Query: 529 SLRPGDKKAVTLLADDQLEPLLDKLSGYAKPDERILVLARYHHLKPAALEKAATRWPKLQ 588
           S +   +KAV L  +  +E +LD+++      + +L+L R H+ KP  L+    R+  L+
Sbjct: 535 SFKTQKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQNRYLSLK 594

Query: 589 LEFMTIHASKGQQADYVIVVGLKEGSDGFPAPARESVMEEALLPVPEDFPDAEERRLLYV 648
           L+FMT HASKG++ADYVI++ + EG   FPA  +   +++AL    +DFP AEERRL YV
Sbjct: 595 LDFMTCHASKGKEADYVIILAVDEGQ--FPARVKALHLDDALNQSEDDFPYAEERRLFYV 652

Query: 649 ALTRARHRVWLLFNKEEPSAFVDILKSIDVPVARK 683
           ALTRA+ +VW+ +N    S+FV  L + D PV ++
Sbjct: 653 ALTRAKEKVWVTYN-GNGSSFVQELLNDDYPVVKQ 686